Table 1.
Oligo | Sequence 5' to 3' | Use |
---|---|---|
P1-pKD4-XhoI | ATATATCTCGAGTGTAGGCTGGAGCTGCTTCG, XhoI | PCR FRT-kan-FRT |
P2-star-pKD4-XhoI | TATATACTCGAGCATATGAATATCCTCCTTAG, XhoI | PCR FRT-kan-FRT |
O78pol-BamHI-F | ATATGGATCCATTGATCTCTATTATCGTATTATTCCAC, BamHI | PCR wzyO78 |
O78pol-EcoRI-R | ATATGAATTCGTTCGTAATGTGTCATTTCTCCATCGACAC, EcoRI | PCR wzyO78 |
O78 invers BglII-F | AATTAGATCTTTCCATTCGTTATTTGATAGC, BglII | Inverse PCR |
O78 invers BglII-R | TTAAAGATCTAAGCGAATAACGCAGCAGCAAC, BglII | Inverse PCR |
gne-SalI-F | ATCGGTCGACGCTCTCCCTTATGCG, SalI | PCR gne to pglJ |
pglJ-SbfI-R | AACCACTTAACGTTTAACCTGCAGGATATAACGTGCAATTTTTACTTTATCAAAAGC, SbfI | PCR gne to pglJ |
pglA-SbfI-F | AATTGCAATTTATATCCTGCAGGTTAAAATTTAAGGGTTGAAAATGAGAATAGG, SbfI | PCR pglA to pglG |
pglG-BamHI-R | TCCTGTGGATCCCCCGGGCTGCAGGAATTCGATC, BamHI | PCR pglA to pglG |
pglH-XhoI-F | ATATCTCGAGAGCTTAAAGAGGAGAAATGATGAAAATAAGC, XhoI | PCR pglH |
pglK-XhoI-R | ATATCTCGAGATCATTTCTCCTCTTTAAGCTTACC, XhoI | PCR gne to pglK |
gne-BamHI-F1 | AATGGATCCAGTTTTTGCAAAAGCTTGTG, BamHI | PCR gne to pglA |
pglA-BamHI-R | AATGGATCCTCATACATTCTTAATTACCC, BamHI | PCR gne to pglA |
O78-outside-F | TCATAATATCATAACAGGGGTCATGAGC | PCR, confirm integration |
O78-outside-R | TTGTGATTGTATAACCCAGCTCTTTATAC | PCR, confirm integration |
pglA-F | AAATGCTGCCCAAGATGCTTTACAATACG | PCR, confirm integration |
gne-R | TTAAAGTATGAGAACCTATATAACCTGC | PCR, confirm integration |
Restriction sites are underlined; restriction enzymes (if applicable) are indicated.