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. 2021 Dec 2;11:23314. doi: 10.1038/s41598-021-98792-1

Figure 4.

Figure 4

Most significant pathways identified by functional GWAS. (A) cholinergic synapse pathway and (B) calcium signalling pathway. The two KEGG pathways are interconnected (B). The KEGG pathway calcium signalling has been edited to add three additional genes of relevance (green rectangles). Each node can represent multiple genes. Symbols in the two panels are the same as in the original KEGG pathway map (NCX: Na/Ca exchanger; PMCA: ATPase plasma membrane Ca2 + transporting; CaV12: calcium voltage-gated channel subunit alpha1 A and C; ROC: nicotinic acetylcholine receptor alpha-7; GPCR: cysteinyl leukotriene receptor 1; PTK: epidermal growth factor receptor; CD38: ADP-ribosyl cyclase 1; PLC: phosphatidylinositol phospholipase C; Gs: guanine nucleotide-binding protein G(s) subunit alpha; Gq: guanine nucleotide-binding protein subunit alpha-11; SERCA: P-type Ca2 + transporter type 2A; IP3R: inositol 1,4,5-triphosphate receptor type 1; TnC: troponin C; MLCK: myosin-light-chain kinase; PHK: phosphorylase kinase alpha/beta subunit; NOS: nitric-oxide synthase; PDE1: calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase; FAK2: focal adhesion kinase 2; IP3 3 K: 1D-myo-inositol-triphosphate 3-kinase; M1: muscarinic acetylcholine receptor M1; M2: muscarinic acetylcholine receptor M2; M3: muscarinic acetylcholine receptor M3; M5: muscarinic acetylcholine receptor M5; VGCC: calcium voltage-gated channel subunit alpha1 C; AChE: acetylcholinesterase; Gi/o: G protein subunit beta 5; CAMK: CAMK2G and CAMK2B; CREB: cAMP responsive element binding protein 3; PKB/Akt: AKT serine/threonine kinase 3). Genes shown in this figure map to SNPs with p value < 0.05.