Antibodies |
|
|
Goat anti-Mouse polyclonal IgG HRP-linked antibody |
Santa Cruz |
Cat$sc-2005; RRID:AB_631736 |
Goat anti-rabbit IgG (H+L) Antibody, Alexa Fluor 488 |
ThermoFisher Scientific |
Cat#A32731; RRID:AB_2633280 |
Goat anti-rabbit IgG (H+L) Antibody, Alexa Fluor 568 |
Molecular Probes |
Cat#A-11004; RRID:AB_2534072 |
Goat anti-Rabbit IgG HRP-linked antibody |
Cell Signaling |
Cat#7074S, RRID:AB_2099233 |
Mouse monoclonal anti-DDIT3 (L63F7) |
Cell Signaling |
Cat#2895; RRID:AB_2089254 |
Mouse monoclonal anti-INSRbeta (C-19) |
Santa Cruz |
Cat#sc-711; RRID:AB_631835 |
Mouse monoclonal anti-SQSTM1/P62 |
Abnova |
Cat#H00008878-M03; RRID:AB_1112274 |
Rabbit monoclonal anti-ADGRE1/F4/80 (D2S9R) |
Cell Signaling |
CAT#70076; RRID:AB_2799771 |
Rabbit monoclonal anti-ATG7 |
Abgent |
Cat#AP1813a; RRID:AB_636747 |
Rabbit monoclonal anti-EIF2AK3(D11A8) |
Cell Signaling |
Cat#5683, RRID:AB_10841299 |
Rabbit monoclonal anti-FOXO1 (C29H4) |
Cell Signaling |
Cat#76764; RRID:AB_2799887 |
Rabbit monoclonal anti-HSPA5(C50B12) |
Cell Signaling |
Cat#3177S; RRID:AB_2119845 |
Rabbit monoclonal anti-Phospho-AKT1 (Ser473) (D9E) |
Cell Signaling |
Cat#4060; RRID:AB_2315049 |
Rabbit monoclonal anti-phospho-EIF2AK3 (Thr980) |
Cell Signaling |
Cat#3179S; RRID:AB_2095853 |
Rabbit monoclonal anti-TUBA (11H10) |
Cell Signaling |
Cat#2125S; RRID:AB_2619646 |
Rabbit polyclonal anti-ACTB(H-300) |
Santa Cruz |
Cat#sc-10731; RRID:AB_2223515 |
Rabbit polyclonal anti-ADH5 |
Abcam |
Cat#91385; RRID:AB_2049142 |
Rabbit polyclonal anti-AKT1 2/3 (H-136) |
Santa Cruz |
Cat#sc-8312; RRID:AB_671714 |
Rabbit polyclonal anti-ATG5 |
Novus |
Cat#NB110-53818; RRID:AB_828587 |
Rabbit polyclonal anti-Histone H3K27me3 Active Motif |
ThermoFisher Scientific |
Cat#39156; RRID:AB_2867260 |
Rabbit polyclonal anti-HSF1 |
Cell Signaling |
Cat#4356S; RRID:AB_2120258 |
Rabbit polyclonal anti-MAP1LC3B |
Novus |
Cat#NB600-1384; RRID:AB_669581 |
Rabbit polyclonal anti-phospho-FOXO1 (Ser256) |
Cell Signaling |
Cat#9461; RRID:AB_329831 |
Rabbit polyclonal anti-UCP1 |
Abcam |
Cat#ab10983; RRID:AB_2241462 |
TMT Monoclonal Antibody (25D5) |
ThermoFisher Scientific |
Cat#90075; RRID:AB_10854708 |
Bacterial and virus strains |
|
|
Adeno-Adh5
|
Dr. Ling Yang; Qian et al., 2018
|
N/A |
Adeno-GFP |
Yang et al., 2015
|
N/A |
Chemicals, peptides, and recombinant proteins |
|
|
1400W |
Sigma |
Cat#214358-33-5 |
3-Isobutyl-1 -methylxanthine (IBMX) |
Sigma |
Cat#I5879 |
3,3′-Diaminobenzidine (DAB) Liquid Substrate System tetrahydrochloride |
Sigma |
Cat#D7304-1SET |
5-Aza-2′-Deoxycytidine (5aza) |
Sigma |
Cat#189825 |
Adenosine 5′-diphosphate bis(cyclohexylammonium) salt (ADP) |
Sigma |
Cat#A4386 |
CL316, 243 |
Sigma |
Cat#C5976 |
DAPI (4′,6-diamidino-2-phenylindole) |
ThermoFisher Scientific |
Cat#D1306 |
Dexamethasone |
Sigma |
Cat#D4902 |
Guanosine 5′-diphosphate sodium salt (GDP) |
Sigma |
Cat#G7127 |
HSF1A |
Millipore |
Cat#1196723-93-9 |
Humulin R U-500 |
Lily |
Cat#0002-8501-01 |
Indomethacin |
Sigma |
Cat#4025268 |
Iodoacetyl Tandem Mass TagTM (iodoTMTTM) Reagents |
ThermoFisher Scienticic |
Cat#90102 |
Isoproterenol |
Sigma |
Cat#54750-10-6 |
KRIBB11 |
Sigma |
Cat#385570 |
Liberase |
Roche |
Cat#5401119001 |
Lipofectamine 2000 |
ThermoFisher Scientific |
Cat#L30000015 |
Malate |
Sigma |
Cat#W237418 |
N6022 |
Sigma |
Cat#1208315-24-5 |
NDC 0409-6648-02 DEXTROSE |
Hospira |
Cat#0409-6648-02 |
Recombinant human UCP1 |
MyBiosource |
Cat#MBS963514 |
Rosiglitazone |
Sigma |
Cat#557366-M |
S-Nitroso-N-acetyl-DL-penicillamine (SNAP) |
Sigma |
Cat#N3398 |
Sodium pyruvate |
Sigma |
Cat#P5280 |
Succinate |
Sigma |
Cat#W239607 |
Critical commercial assays |
|
|
Free Fatty Acid Fluorometric Assay Kit |
Cayman Chemical |
Cat#700310 |
Luciferase Assay |
Promega |
Cat#E1500 |
NBEBuilder HiFi DNA assembly system |
NEB |
Cat# E5520S |
Nitrate/Nitrite Colorimetric Assay Kit |
Cayman Chemical |
Cat#780001 |
Pierce S-Nitrosylation Western Blot Kit |
ThermoFisher Scientific |
Cat#90105 |
Renilla Luciferase Assay |
Promega |
Cat#E2810 |
VECTASTAIN® ABC-HRP Kit, Peroxidase (Standard) PK-4000 |
Vector Laboratories |
Cat#PK-4000 |
Experimental models: Cell lines |
|
|
Human: A41hBAT-SVF |
ATCC |
Cat#CRL-3385 |
Human: HEK293A |
ATCC |
Cat#CRL-1573 |
Mouse: Brown Adipocytes |
Dr. Ling Yang |
N/A |
Mouse: Stromal Vascular Fraction |
Dr. Ling Yang |
N/A |
Experimental models: Organisms/strains |
|
|
Mouse: Adh5BKO
|
This paper |
N/A |
Mouse; Adh5fl
|
Dr. Limin Liu; Wei et al.; 2011
|
N/A |
Mouse: C57BL/6J |
The Jackson Laboratory |
JAX: Cat#000664 |
Mouse: FVB-Tg(UCP1-cre)1Evdr/J |
The Jackson Laboratory |
JAX: Cat#024670 |
Oligonucleotides. See Table S1. |
|
|
Recombinant DNA |
|
|
Plasmid:C305AUCP1 |
This paper |
N/A |
Plasmid:GFP |
This paper |
N/A |
Plasmid:pcDNA3.1-IDH2-WT |
Addgene |
Cat#V790-20 |
Plasmid:WTUCP1 |
This paper |
N/A |
Software and algorithms |
|
|
GraphPad Prism 9.20 |
GraphPad Software, LLC. |
https://www.graphpad.com/scientific-software/prism/
|
Image Studio Lite |
LI-COR Biosciences |
https://www.licor.com/bio/image-studio-lite/
|
ImageJ |
Schneider et al., 2012
|
https://imagej.nih.gov/ij/
|
Other |
|
|
60%kCal high-fat diet |
Research Diets |
Cat#D12492 |
Oil Red O staining |
Sigma |
Cat#O0625 |
Opti-MEM |
ThermoFisher Scientific |
Cat#31985-062 |
Teklad global soy protein-free extruded 2920X |
Teklad Global Diet |
N/A |