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. 2021 Dec 3;22:870. doi: 10.1186/s12864-021-08166-0

Table 2.

Pathway and Network Genes and Proteins with GWAS SNPs

Gene Symbol Pathway or Network Trait
APOA1

HDAC1 Network

PPARA Network

XBP1 Network

Very low-density lipoprotein cholesterol
ATG7

KLF15 Network

Sirtuin Signaling Pathway

Fat body mass
CLIP1 Remodeling of Epithelial Adherens Junctions Body mass index
FABP1

HDAC1 Network

PPARA Network

Non-alcoholic fatty liver disease

Hepatic fibrosis

GOT2 Sirtuin Signaling Pathway

Triglycerides

Aspartate aminotransferase

MET

MITF Network

Remodeling of Epithelial Adherens Junctions

Triglycerides
MITF MITF Network

Low-density lipoprotein cholesterol

Triglycerides

PNPLA2 PPARA Network Body fat distribution
PPARA PPARA Network

Type II Diabetes

Total cholesterol

Low-density lipoprotein cholesterol

Triglycerides

RAC1

Actin Nucleation by ARP-WASP Complex

Integrin Signaling

Leukocyte Extravasation Signaling

Paxillin Signaling

Low-density lipoprotein cholesterol
RAP1GAP Leukocyte Extravasation Signaling Alkaline phosphatase
SORT1 MITF Network

Type II Diabetes

Coronary artery disease

LDL cholesterol change

TNFRSF11B Necroptosis Signaling Pathway Alkaline phosphatase