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. Author manuscript; available in PMC: 2022 Dec 2.
Published in final edited form as: Mol Cell. 2021 Nov 1:S1097-2765(21)00842-X. doi: 10.1016/j.molcel.2021.10.013

Figure 1. Overview of matched scRNA-seq and scATAC-seq workflow for patient tumors.

Figure 1.

A) Cartoon showing patient tumor workflow. The female reproductive system cartoons, top, were created with BioRender.com.

B) UMAP plot all scRNA-seq cells color-coded by cell type across 11 patient tumors (left). UMAP plot of all scATAC-seq cells color-coded by inferred cell type across 11 patient tumors (right).Color shades denote subclusters within each cell type.

C) UMAP plot of scRNA-seq cells (left) and scATAC-seq cells (right) as shown in panel B but color-coded by patient of origin.

D) Stacked bar charts showing contribution of each patient to each subcluster in scRNA-seq (left) and to each inferred cell type subcluster in scATAC-seq (right).