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. 2020 Jul 15;11(4):700–711. doi: 10.34172/apb.2021.079

Table 3. Free energy of coupling for ligand-solvent and ligand-receptor system obtained from MBAR method. Total ΔGbind.

Ref surface A30T surface Ref mlddle A30T middle Ref middle_wat A30T middle_wat Ref deep A30T deep
ΔGsolv_coul -294.6±0.7
ΔGsolv_vdw 4.5±0.5
ΔGsolv(wdv+coul) -290.1±0.9
ΔΔGDSF_solv 0.6
ΔΔGNET+ΔΔGUSV 0.78
ΔΔGRIP_solv 0.13
ΔGsolv_rest -31.1 -30.2 -33.4 -30.8 -32.4 -31.7 -32.0 -31.9
ΔGprot_restr -12.8±0.1 -8.1±0.0 -8.0±0.0 -19.5±0.1 -9.5 ±0.0 -9.4 ± 0.0 -33.2±0.1 -11.4±0.1
ΔGprot_coul -301.3±0.5 -314.0±0.3 -175.8±0.6 -195.8±0.7 -259.5 ± 0.5 -280.8 ± 0.7 -232.8±0.7 -246.5±0.8
ΔGprot_vdw -15.6±0.1 -6.6±0.2 -55.6±0.1 -78.9±0.1 -52.9 ± 0.2 -34.4 ± 0.1 -80.1±0.1 -76.9±0.5
ΔGprot(wdv+couk+restr) -329.7±1.3 -328.8±1.1 -239.5±1.4 -294.2±1.5 -322.0±1.4 -324.5 ± 1.9 -346.0±1.6 -334.9±1.6
ΔΔGDSF 18.4 18.5 18.6 18.6 18.5 18.3 18.5 18.4
ΔΔGNET+ΔΔGUSV 0.26
ΔΔGRIP -4.2 -4.0 -3.7 -3.8 -3.4 -3.4 -4.2 -4.1
ΔGbind 4.5±1.6 4.8±1.4 97.7±1.7 40.4±1.7 14.4±1.7 11.0±2.1 -10.9±1.8 0.1±1.8