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. 2021 Nov 26;49(21):12089–12105. doi: 10.1093/nar/gkab1097

Table 1.

T m and ΔTm/mod data from UV-melting curves (260 nm) of ON1-5 in duplex with complementary DNA and RNA.

Entry Sequencea,b,c T m versus DNA [°C] ΔTm/mod [°C] T m versus RNA [°C] ΔTm/mod [°C]
ON1 5′-d(GGA TGT TCt CGA)-3′ 40.0 -9.1 42.6 -6.8
ON2 5′-d(GGA t GT TCT CGA)-3′ 43.0 -6.1 45.8 -3.6
ON3 5′-d(GGA tGT TCt CGA)-3′ 32.8 -8.1 38.0 -5.7
ON4 5′-d(GGA TGt tCT CGA)-3′ 42.9 -3.1 47.0 -1.2
ON5 5′-d(GCA ttt ttA CCG)-3′d 34.0 -2.7 37.2 -1.4

aTotal strand conc. 2 μM in 10 mM NaH2PO4, 150 mM NaCl, pH 7.0.

bA, G, T, C denote natural 2‘-deoxynucleosides; t corresponds to modified nucleosides.

c T m of unmodified duplexes, DNA/DNA: 49.1°C, DNA/RNA: 49.4°C, RNA/RNA: 60.3°C.

d T m of unmodified duplexes, DNA/DNA: 47.5°C, DNA/RNA: 44.0°C.