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. 2021 Nov 26;49(21):12089–12105. doi: 10.1093/nar/gkab1097

Table 3.

T m values from UV-melting curves (260 nm) of ON7-8 and Tc1 in duplex with ON6.

Entry Sequencea,b NaCl concentration [mM] ΔTm versus ON6c [°C]
ON7 5’-d(cct aca aga gct)-7′ 150 83.6
ON7 5′-d(cct aca aga gct)-7′ 50 79.6
ON7 5′-d(cct aca aga gct)-7′ 0 68.6
ON8 5′-d(tcg aga aca tcc)-7′ 150 <10
Tc1 5′-d(tcg agaacatcc)-3′ 150 81.0

aTotal strand conc. 2μM in 10 mM NaH2PO4, pH 7.0.

b a, g, t, c corresponds to modified adenine, guanine, thymine and methylcytosine, respectively, a, g, t, c corresponds to tricyclo-DNA adenine, guanine, thymine and methylcytosine, respectively.

c ON6 sequence: 5′-d(agc tct tgt agg)-7′.