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. 2021 Nov 26;49(21):12089–12105. doi: 10.1093/nar/gkab1097

Table 5.

Summary of the relevant parameters for each conformer. ΔE have been calculated taking the absolute minima for each nucleoside as reference.

Nucleoside Phase [°] Carbocyclic ring conformation γ [°] χ [°] ΔE in vacuo [kcal mol−1]
Thymine Conformer a 349 C5′-exo,C6′-endo 162 161 0.409
Conformer b 110 C6′-endo 153 175 0.884
Conformer c 301 C6′-exo 89 141 0
Conformer d 176 C5′-endo 77 166 0.469
Methylcytosine Conformer a 350 C5′-exo,C6′-endo 162 167 0
Conformer b 107 C6′-endo 154 174 0.604
Conformer c 303 C6′-exo 90 163 0.393
Conformer d 176 C5′-endo 77 167 0.608
Adenine Conformer a 349 C5′-exo,C6′-endo 162 165 0.669
Conformer b 114 C6′-endo 153 -173 0
Conformer c 303 C6′-exo 89 144 0.136
Conformer d 163 C5′-endo 78 175 0.021
Guanine Conformer a 349 C5′-exo,C6′-endo 162 155 0.881
Conformer b 114 C6′-endo 152 -177 0.382
Conformer c 300 C6′-exo 88 139 0.056
Conformer d 164 C5′-endo 78 171 0