Figure 3.

Genome-wide selection scan for PSGs in CA chickens using sliding window analysis (40 kb window size, 20 kb step size, kb increment, 99^th percentile cutoff)

A: Selection signatures in CA chickens for Fst_CA-to-ME. B: Selection signatures in CA chickens for π-Ratio_ME/CA. C: Selection signatures in CA chickens for XPEHH_CA-to-ME. Threshold (top 1%) of Fst_CA-to-ME, π-Ratio_ME/CA, and XPEHH_CA-to-ME is marked with a horizontal black line. D: Number of PSGs identified in CA chickens by the three methods listed in each Venn diagram component.