Table 1.
List of genes annotated in the chloroplast genomes of Staphania tetrandra voucher ZJ
No. | Group of genes | Gene names | Amount |
---|---|---|---|
1 | Photosystem I | psaJ, psaC, psaB, psaA, psaI | 5 |
2 | Photosystem II | psbE, psbB, psbT, psbN, psbH, psbJ, psbL, psbF, psbA, psbK, psbI, psbM, psbD, psbZ | 14 |
3 | Cytochrome b/f complex | petL, petG, petB*, petD*, petA, petN | 6 |
4 | ATP synthase | atpE, atpB, atpA, atpF*, atpH, atpI | 6 |
5 | NADH dehydrogense | ndhB*(× 2), ndhF, ndhD, ndhE, ndhJ, ndhK, ndhC, ndhA*, ndhG, ndhI, ndhH | 12 |
6 | RubisCO large subunit | rbcL | 1 |
7 | RNA polymerase | rpoA, rpoC2, rpoC1*, rpoB, | 4 |
8 | Ribosomal proteins (SSU) | rps11, rps8, rps3, rps19, rps7, rps14, rps4, rps18, rps12**(×2), rps16*, rps2, rps15 | 13 |
9 | Ribosomal proteins (LSU) | rpl33, rpl20, rpl36, rpl14, rpl16*, rpl22, rpl2*(×2), rpl23(× 2), rpl32, rpl33, rpl20 | 13 |
10 | Other genes | clpP**, infA, ccsA, accD, cemA, matK | 6 |
11 | Proteins of unknown function | ycf2(×2), ycf3**, ycf4, ycf1, ycf15(× 2) | 7 |
12 | Transfer RNAs | 37 tRNAs (8 contain an intron,7 in the IRs) | 37 |
13 | Ribosomal RNAs | rrn4.5(×2), rrn5(× 2), rrn16(× 2), rrn23(× 2) | 8 |
14 | pseudo genes | ycf1, rps19 | 2 |
One or two asterisks after a gene indicate that the gene contains one or two introns, respectively