Fig. 50.

Phylogram generated from maximum likelihood analysis based on combined SSU, LSU, ITS, TEF1-α and RPB2 sequence data to indicate the newly generated strains in Lophiotremataceae. Sixty strains are included in the combined analyses which comprise a total of 4357 characters. Murilentithecium clematidis (MFLUCC 14-0561 and MFLUCC 14-0562) is selected as the outgroup taxon. The best RAxML tree with a final likelihood value of − 24211.323363 is presented. RAxML analysis yielded 1272 distinct alignment patterns and 6.17% of undetermined characters or gaps. Estimated base frequencies were as follows: A = 0.246394, C = 0.256619, G = 0.267068, T = 0.229919, with substitution rates AC = 1.576531, AG = 4.38051, AT = 1.49611, CG = 1.339907, CT = 10.502267, GT = 1.000000; gamma distribution shape parameter alpha = 0.450773. Bootstrap support values for maximum likelihood (MLBS, left) equal to or greater than 70% is given above the nodes. Ex-type strains are in bold and newly generated sequences are in blue