Table 2.
Isolates and GenBank accession numbers used in the phylogenetic analyses of Diaporthe.
| Species | Strain | Host | Origin | GenBank accession numbers | ||||
|---|---|---|---|---|---|---|---|---|
| ITS | cal | his3 | tef1 | tub2 | ||||
| Diaportheacaciigena | CBS 129521 | Acaciaretinodes | Australia | KC343005 | KC343247 | KC343489 | KC343731 | KC343973 |
| D.acericola | MFLUCC 17-0956 | Acernegundo | Italy | KY964224 | KY964137 | NA | KY964180 | KY964074 |
| D.acerigena | CFCC 52554 | Acertataricum | China | MH121489 | MH121413 | MH121449 | MH121531 | NA |
| D.acerigena | CFCC 52555 | Acertataricum | China | MH121490 | MH121414 | MH121450 | MH121532 | NA |
| D.acuta | PSCG 047 | Pyruspyrifolia | China | MK626957 | MK691125 | MK726161 | MK654802 | MK691225 |
| D.acutispora | LC6161 | Coffea | China | KX986764 | KX999274 | KX999235 | KX999155 | KX999195 |
| D.alangii | CFCC 52556 | Alangiumkurzii | China | MH121491 | MH121415 | MH121451 | MH121533 | MH121573 |
| D.alangii | CFCC 52557 | Alangiumkurzii | China | MH121492 | MH121416 | MH121452 | MH121534 | MH121574 |
| D.albosinensis | CFCC 53066 | Betulaalbosinensis | China | MK432659 | MK442979 | MK443004 | MK578133 | MK578059 |
| D.albosinensis | CFCC 53067 | Betulaalbosinensis | China | MK432660 | MK442980 | MK443005 | MK578134 | MK578060 |
| D.alleghaniensis | CBS 495.72 | Betulaalleghaniensis | Canada | MH121502 | MH121426 | MH121462 | MH121544 | MH121584 |
| D.ambigua | CBS 114015 | Pyruscommunis | South Africa | KC343010 | KC343252 | KC343494 | KC343736 | KC343978 |
| D.ampelina | STE-U 2660 | Vitisvinifera | France | NA | AY745026 | NA | AY745056 | NA |
| D.amygdali | CBS 126679 | Prunusdulcis | Portugal | MH864208 | KC343264 | KC343506 | KC343748 | KC343990 |
| D.anacardii | CBS 720.97 | Anacardiumoccidentale | East Africa | KC343024 | KC343266 | KC343508 | KC343750 | KC343992 |
| D.angelicae | CBS 111592 | Heracleumsphondylium | Austria | KC343027 | KC343269 | KC343511 | KC343753 | KC343995 |
| D.apiculatum | CFCC 53068 | Rhuschinensis | China | MK432651 | MK442973 | MK442998 | MK578127 | MK578054 |
| D.apiculatum | CFCC 53069 | Rhuschinensis | China | MK432652 | MK44297 | MK442999 | MK578128 | MK578055 |
| D.aquatica | IFRDCC 3051 | Aquatic habitat | China | JQ797437 | NA | NA | NA | NA |
| D.arctii | DP0482 | Arctiumlappa | Austria | KJ590736 | KJ612133 | KJ659218 | KJ590776 | KJ610891 |
| D.arecae | CBS 161.64 | Arecacatechu | India | KC343032 | KC343274 | KC343516 | KC343758 | KC344000 |
| D.arengae | CBS 114979 | Arengaengleri | Hong Kong | MF773664 | KC343276 | KC343518 | KC343760 | KC344002 |
| D.aseana | MFLUCC 12-0299a | Unknown | Thailand | KT459414 | KT459464 | NA | KT459448 | KT459432 |
| D.asheicola | CBS 136967 | Vacciniumashei | Chile | KJ160562 | KJ160542 | NA | KJ160594 | KJ160518 |
| D.aspalathi | CBS 117169 | Aspalathuslinearis | South Africa | KC343036 | KC343278 | KC343520 | KC343762 | KC344004 |
| D.australafricana | CBS 111886 | Vitisvinifera | Australia | KC343038 | KC343280 | KC343522 | KC343764 | KC344006 |
| D.australiana | CBS 146457 | Macadamia | Australia | MN708222 | NA | NA | MN696522 | MN696530 |
| D.baccae | CBS 136972 | Vacciniumcorymbosum | Italy | MK370623 | MG281695 | MF418264 | KJ160597 | MF418509 |
| D.batatas | CBS 122.21 | Ipomoeabatatas | USA | KC343040 | KC343282 | KC343524 | KC343766 | KC344008 |
| D.bauhiniae | CFCC 53071 | Bauhiniapurpurea | China | MK432648 | MK442970 | MK442995 | MK578124 | MK578051 |
| D.bauhiniae | CFCC 53072 | Bauhiniapurpurea | China | MK432649 | MK442971 | MK442996 | MK578125 | MK578052 |
| D.bauhiniae | CFCC 53073 | Bauhiniapurpurea | China | MK432650 | MK442972 | MK442997 | MK578126 | MK578053 |
| D.beilharziae | BRIP 54792 | Indigoferaaustralis | Australia | JX862529 | NA | NA | JX862535 | KF170921 |
| D.benedicti | SBen914 | Diaporthebenedicti | USA | KM669929 | KM669862 | NA | KM669785 | NA |
| D.betulae | CFCC 50469 | Betulaplatyphylla | China | KT732950 | KT732997 | KT732999 | KT733016 | KT733020 |
| D.betulae | CFCC 50470 | Betulaplatyphylla | China | KT732951 | KT732998 | KT733000 | KT733017 | KT733021 |
| D.betulicola | CFCC 51128 | Betulaalbo-sinensis | China | KX024653 | KX024659 | KX024661 | KX024655 | KX024657 |
| D.betulicola | CFCC 51129 | Betulaalbo-sinensis | China | KX0246554 | KX024660 | KX024662 | KX0246556 | KX024658 |
| D.betulina | CFCC 52560 | Betulaalbo-sinensis | China | MH121495 | MH121419 | MH121455 | MH121537 | MH121577 |
| D.betulina | CFCC 52561 | Betulaalbo-sinensis | China | MH121496 | MH121420 | MH121456 | MH121538 | MH121578 |
| D.biconispora | ZJUD62 | Citrusmaxima | China | KJ490597 | NA | KJ490539 | KJ490476 | KJ490418 |
| D.biguttulata | ZJUD47 | Citruslimon | China | KJ490582 | NA | KJ490524 | KJ490461 | KJ490403 |
| D.bohemiae | CBS 143347 | Vitisvinifera | Czech Republic | MK300012 | MG281710 | MG281361 | MG281536 | MG281188 |
| D.brasiliensis | CBS 133183 | Aspidospermatomentosum | Brazil | KC343042 | KC343284 | KC343526 | KC343768 | KC344010 |
| D.caatingaensis | URM7485 | Tacingainamoena | Brazil | KY085927 | KY115598 | NA | KY115604 | KY115601 |
| D.camelliae-sinensis | SAUCC194.92 | Camelliasinensis | China | MT822620 | MT855699 | MT855588 | MT855932 | MT855817 |
| D.canthii | CPC 19740 | Canthiuminerme | South Africa | JX069864 | NA | NA | NA | NA |
| D.caryae | CFCC 52563 | Caryaillinoinensis | China | MH121498 | MH121422 | MH121458 | MH121540 | MH121580 |
| D.caryae | CFCC 52564 | Caryaillinoinensis | China | MH121499 | MH121423 | MH121459 | MH121541 | MH121581 |
| D.cassines | CPC 21916 | Cassineperagua | South Africa | KF777155 | NA | NA | KF777244 | NA |
| D.caulivora | CBS 127268 | Glycinemax | Croatia | MH864501 | KC343287 | KC343529 | KC343771 | KC344013 |
| D.cercidis | CFCC 52565 | Cercischinensis | China | MH121500 | MH121424 | MH121460 | NA | MH121582 |
| D.cercidis | CFCC 52566 | Cercischinensis | China | MH121501 | MH121425 | MH121461 | NA | MH121583 |
| D.chamaeropis | CBS 454.81 | Chamaeropshumilis | Greece | KC343048 | KC343290 | KC343532 | KC343774 | KC344016 |
| D.charlesworthii | BRIP 54884m | Rapistrumrugostrum | Australia | KJ197288 | NA | NA | KJ197250 | KJ197268 |
| D.chensiensis | CFCC 52567 | Abieschensiensis | China | MH121502 | MH121426 | MH121462 | MH121544 | MH121584 |
| D.chensiensis | CFCC 52568 | Abieschensiensis | China | MH121503 | MH121427 | MH121463 | MH121545 | MH121585 |
| D.chongqingensis | PSCG 435 | Pyruspyrifolia | China | MK626916 | MK691209 | MK726257 | MK654866 | MK691321 |
| D.chrysalidocarpi | SAUCC194.35 | Chrysalidocarpuslutescens | China | MT822563 | MT855646 | MT855532 | MT855760 | MT855876 |
| D.cichorii | MFLUCC 17-1023 | Cichoriumintybus | Italy | KY964220 | KY964133 | NA | KY964176 | KY964104 |
| D.cinnamomi | CFCC 52569 | Cinnamomum | China | MH121504 | NA | MH121464 | MH121546 | MH121586 |
| D.cinnamomi | CFCC 52570 | Cinnamomum | China | MH121505 | NA | MH121465 | MH121547 | MH121587 |
| D.cissampeli | CPC 27302 | Cissampeloscapensis | South Africa | KX228273 | NA | KX228366 | NA | KX228384 |
| D.citri | AR3405 | Citrus | USA | KC843311 | KC843157 | KJ420881 | KC843071 | KC843187 |
| D.citri | CFCC 53079 | Citrussinensis | China | MK573940 | MK574579 | MK574595 | MK574615 | MK574635 |
| D.citriasiana | CGMCC 3.15224 | Citrusunshiu | China | JQ954645 | KC357491 | KC490515 | JQ954663 | KC357459 |
| D.citrichinensis | CGMCC 3.15225 | Citrus | China | JQ954648 | KC357494 | NA | JQ954666 | NA |
| D.collariana | MFLU 17-2770 | Magnoliachampaca | Thailand | MG806115 | MG783042 | NA | MG783040 | MG783041 |
| D.compactum | LC3083 | Camelliasinensis | China | KP267854 | NA | KP293508 | KP267928 | NA |
| D.conica | CFCC 52571 | Alangiumchinense | China | MH121506 | MH121428 | MH121466 | MH121548 | MH121588 |
| D.conica | CFCC 52572 | Alangiumchinense | China | MH121507 | MH121429 | MH121467 | MH121549 | MH121589 |
| D.constrictospora | CGMCC 3.20096 | Unknown | China | MT385947 | MT424718 | MW022487 | MT424682 | MT424702 |
| D.convolvuli | CBS 124654 | Convolvulusarvensis | Turkey | KC343054 | KC343296 | KC343538 | KC343780 | KC344022 |
| D.coryli | CFCC 53083 | Corylusmandshurica | China | MK432661 | MK442981 | MK443006 | MK578135 | MK578061 |
| D.coryli | CFCC 53084 | Corylusmandshurica | China | MK432662 | MK442982 | MK443007 | MK538176 | MK578062 |
| D.corylicola | CFCC 53986 | Corylusheterophylla | China | MW839880 | MW836684 | MW836717 | MW815894 | MW883977 |
| D.corylicola | CFCC 53987 | Corylusheterophylla | China | MW839867 | MW836685 | MW836718 | MW815895 | MW883978 |
| D.crotalariae | CBS 162.33 | Crotalariaspectabilis | USA | MH855395 | JX197439 | KC343540 | GQ250307 | KC344024 |
| D.crousii | CAA 823 | Vacciniumcorymbosum | Portugal | MK792311 | MK883835 | MK871450 | MK828081 | MK837932 |
| D.cucurbitae | DAOM 42078 | Cucumis | Canada | KM453210 | NA | KM453212 | KM453211 | KP118848 |
| D.cuppatea | CBS 117499 | Aspalathuslinearis | South Africa | MH863021 | KC343299 | KC343541 | KC343783 | KC344025 |
| D.cynaroidis | CBS 122676 | Proteacynaroides | South Africa | KC343058 | KC343300 | KC343542 | KC343784 | KC344026 |
| D.cytosporella | FAU461 | Citruslimon | Italy | KC843307 | KC843141 | NA | KC843116 | KC843221 |
| D.diospyricola | CPC 21169 | Diospyroswhyteana | South Africa | KF777209 | NA | NA | NA | NA |
| D.discoidispora | ZJUD89 | Citrusunshiu | China | KJ490624 | NA | KJ490566 | KJ490503 | KJ490445 |
| D.dorycnii | MFLUCC 17-1015 | Dorycniumhirsutum | Italy | KY964215 | NA | NA | KY964171 | KY964099 |
| D.drenthii | CBS 146453 | Macadamia | Australia | MN708229 | NA | NA | MN696526 | MN696537 |
| D.elaeagni-glabrae | LC4802 | Elaeagnusglabra | China | KX986779 | KX999281 | KX999251 | KX999171 | KX999212 |
| D.ellipicola | CGMCC 3.17084 | Lithocarpusglaber | China | KF576270 | NA | NA | KF576245 | KF576294 |
| D.endophytica | CBS 133811 | Schinusterebinthifolius | Brazil | KC343065 | KC343307 | KC343549 | KC343791 | KC344033 |
| D.eres | CBS 146.46 | Alnus | Netherlands | KC343008 | KC343250 | KC343492 | KC343734 | KC343976 |
| D.eres | CBS 121004 | Juglans | USA | KC343134 | KC343376 | KC343618 | KC343860 | KC344102 |
| D.eres | CGMCC 3.17081 | Lithocarpusglabra | China | KF576282 | NA | NA | KF576257 | KF576306 |
| D.eres | CFCC 51632 | Camptothecaacuminata | China | KY203726 | KY228877 | KY228881 | KY228887 | KY228893 |
| D.eres | CBS 139.27 | Celastrus | USA | KC343047 | KC343289 | KC343531 | KC343773 | KC344015 |
| D.eres | CBS 143349 | Vitisvinifera | United Kingdom | MG281017 | MG281712 | MG281363 | MG281538 | MG281190 |
| D.eres | AR5193 | Ulmus | Germany | KJ210529 | KJ434999 | KJ420850 | KJ210550 | KJ420799 |
| D.eres | CFCC 52575 | Castaneamollissima | China | MH121510 | NA | MH121470 | MH121552 | MH121592 |
| D.eres | CFCC 52576 | Castaneamollissima | China | MH121511 | MH121432 | MH121471 | MH121553 | MH121593 |
| D.eres | CFCC 52577 | Acanthopanaxsenticosus | China | MH121512 | MH121433 | MH121472 | MH121554 | MH121594 |
| D.eres | CFCC 52578 | Sorbus | China | MH121513 | MH121433 | MH121473 | MH121555 | MH121595 |
| D.eres | CFCC 52579 | Juglansregia | China | MH121514 | NA | MH121474 | MH121556 | NA |
| D.eres | CFCC 52580 | Meliaazedarace | China | MH121515 | NA | MH121475 | MH121557 | MH121596 |
| D.eres | CFCC 52581 | Rhododendronsimsii | China | MH121516 | NA | MH121476 | MH121558 | MH121597 |
| D.eres | MAFF 625034 | Pyruspyrifolia | Japan | NA | KJ435023 | KJ420868 | NA | KJ420819 |
| D.eres | AR5211 | Hederahelix | France | KJ210538 | KJ435043 | KJ420875 | KJ210559 | KJ420828 |
| D.eres | CGMCC 3.17089 | Lithocarpusglabra | China | KF576267 | NA | NA | KF576242 | KF576291 |
| D.eres | MFLUCC 17-0963 | Lonicera | Italy | KY964190 | KY964116 | NA | KY964146 | KY964073 |
| D.eres | DAOM 695742 | Picearuben | Canada | KU552025 | NA | NA | KU552023 | KU574615 |
| D.eres | MFLUCC 16-0113 | Prunuspersica | China | KU557563 | NA | KU557611 | KU557631 | KU55758 |
| D.eres | CBS 144.27 | Spiraea | USA | KC343144 | KC343386 | KC343628 | KC343870 | KC344112 |
| D.eres | CBS 587.79 | Pinusparvifloravar | Japan | KC343153 | KC343395 | KC343637 | KC343879 | KC344121 |
| D.eres | CBS 338.89 | Hederahelix | Yugoslavia | KC343152 | KC343394 | KC343636 | KC343878 | KC344120 |
| D.eres | MFLU 17-0646 | Rosa | United Kingdom | MG828895 | MG829274 | NA | MG829270 | MG843877 |
| D.eucalyptorum | CBS 132525 | Eucalyptus | China | MH305525 | NA | NA | NA | NA |
| D.foeniculacea | CBS 111553 | Foeniculumvulgare | Spain | MH854926 | KC343343 | KC343585 | KC343827 | KC344069 |
| D.foeniculacea | CFCC 54192 | Quercusrobur | Netherlands | MZ727033 | NA | MZ753474 | MZ816339 | MZ753483 |
| D.foeniculacea | M35 | Quercusrobur | Netherlands | MZ727034 | NA | MZ753475 | MZ816340 | MZ753484 |
| D.foeniculacea | M40-1 | Quercusrobur | Netherlands | MZ727035 | NA | MZ753476 | MZ816341 | MZ753485 |
| D.foeniculacea | M84 | Quercusrobur | Netherlands | MZ727036 | NA | MZ753477 | MZ816342 | MZ753486 |
| D.fraxini-angustifoliae | BRIP 54781 | Fraxinusangustifolia | Australia | JX862528 | KT459462 | NA | JX862534 | NA |
| D.fraxinicola | CFCC 52582 | Fraxinuschinensis | China | MH121517 | MH121435 | NA | MH121560 | NA |
| D.fraxinicola | CFCC 52583 | Fraxinuschinensis | China | MH121518 | MH121436 | NA | MH121559 | NA |
| D.fulvicolor | PSCG 051 | Pyruspyrifolia | China | MK626859 | MK691132 | MK726163 | MK654806 | MK691236 |
| D.fusicola | CGMCC 3.17087 | Lithocarpusglabra | China | KF576281 | KF576233 | NA | KF576256 | KF576305 |
| D.ganjae | CBS 180.91 | Cannabissativa | USA | KC343112 | KC343354 | KC343596 | KC343838 | KC344080 |
| D.ganzhouensis | CFCC 53087 | Unknown | China | MK432665 | MK442985 | MK443010 | MK578139 | MK578065 |
| D.ganzhouensis | CFCC 53088 | Unknown | China | MK432666 | MK442986 | MK443011 | MK578140 | MK578066 |
| D.garethjonesii | MFLUCC 12-0542a | Unknown | Thailand | KT459423 | KT459470 | NA | KT459457 | KT459441 |
| D.goulteri | BRIP 55657a | Helianthusannuus | Australia | KJ197290 | NA | NA | KJ197252 | KJ197270 |
| D.grandiflori | SAUCC194.84 | Heterostemmagrandiflorum | China | MT822612 | MT855691 | MT855580 | MT855809 | MT855924 |
| D.guangxiensis | JZB320087 | Vitisvinifera | China | MK335765 | MK736720 | NA | MK500161 | MK523560 |
| D.gulyae | BRIP 54025 | Helianthusannuus | Australia | NA | NA | NA | JN645803 | KJ197271 |
| D.guttulata | CGMCC 3.20100 | Unknown | China | MT385950 | MW022470 | MW022491 | MT424685 | MT424705 |
| D.helianthi | CBS 592.81 | Helianthusannuus | Serbia | KC343115 | KC343357 | KC343599 | KC343841 | KC344083 |
| D.heliconiae | SAUCC194.77 | Heliconiametallica | China | MT822605 | MT855684 | MT855573 | MT855802 | MT855917 |
| D.heterophyllae | CPC 26215 | Acaciaheterophylla | France | MG600222 | MG600218 | MG600220 | MG600224 | MG600226 |
| D.heterostemmatis | SAUCC194.85 | Heterostemmagrandiflorum | China | MT822613 | MT855692 | MT855581 | MT855810 | MT855925 |
| D.hickoriae | CBS 145.26 | Caryaglabra | USA | KC343118 | KC343360 | NA | KC343844 | KC344086 |
| D.hispaniae | CBS 143351 | Vitisvinifera | Spain | MG281123 | MG281820 | MG281471 | MG281644 | MG281296 |
| D.hongkongensis | CBS 115448 | Dichroafebrifuga | China | MK304388 | KC343361 | KC343603 | KC343845 | KC344087 |
| D.hubeiensis | JZB320123 | Vitisvinifera | China | MK335809 | MK500235 | NA | MK523570 | MK500148 |
| D.incompleta | LC6754 | Camelliasinensis | China | KX986794 | KX999289 | KX999265 | KX999186 | KX999226 |
| D.inconspicua | CBS 133813 | Maytenusilicifolia | Brazil | NA | KC343365 | KC343607 | KC343849 | KC344091 |
| D.infecunda | CBS 133812 | Schinusterebinthifolius | Brazil | KC343126 | KC343368 | KC343610 | KC343852 | KC344094 |
| D.irregularis | CGMCC 3.20092 | Unknown | China | MT385951 | MT424721 | NA | MT424686 | MT424706 |
| D.isoberliniae | CPC 22549 | Isoberliniaangolensis | Zambia | KJ869190 | NA | NA | NA | KJ869245 |
| D.juglandicola | CFCC 51134 | Juglansmandshurica | China | KU985101 | KX024616 | KX024622 | KX024628 | KX024634 |
| D.kadsurae | CFCC 52586 | Kadsuralongipedunculata | China | MH121521 | MH121439 | MH121479 | MH121563 | MH121600 |
| D.kadsurae | CFCC 52587 | Kadsuralongipedunculata | China | MH121522 | MH121440 | MH121480 | MH121564 | MH121601 |
| D.kochmanii | BRIP 54033 | Helianthusannuus | Australia | NA | NA | NA | JN645809 | NA |
| D.kongii | BRIP 54031 | Helianthusannuus | Australia | NA | NA | NA | NA | KJ197272 |
| D.lenispora | CGMCC 3.20101 | Unknown | China | MT385952 | MW022472 | MW022493 | MT424687 | MT424707 |
| D.litchicola | BRIP 54900 | Litchichinensis | Australia | LC041036 | NA | NA | JX862539 | NA |
| D.litchii | SAUCC194.22 | Litchichinensis | China | MT822550 | MT855635 | MT855519 | MT855747 | MT855863 |
| D.lithocarpus | CGMCC 3.15175 | Lithocarpusglabra | China | KC135104 | KF576235 | NA | KC153095 | KF576311 |
| D.longicolla | FAU599 | Glycinemax | USA | KJ590728 | KJ612124 | KJ659188 | KJ590767 | KJ610883 |
| D.longispora | CBS 194.36 | Ribes | Canada | MH855769 | KC343377 | KC343619 | KC343861 | KC344103 |
| D.lusitanicae | CBS 123212 | Foeniculumvulgare | Portugal | MH863279 | KC343378 | KC343620 | KC343862 | KC344104 |
| D.lutescens | SAUCC194.36 | Chrysalidocarpuslutescens | China | MT822564 | MT855647 | MT855533 | MT855761 | MT855877 |
| D.macadamiae | CBS 146455 | Macadamia | Australia | MN708230 | NA | NA | MN696528 | MN696539 |
| D.macintoshii | BRIP 55064a | Rapistrumrugosum | Australia | KJ197289 | NA | NA | KJ197251 | KJ197269 |
| D.mahothocarpus | CGMCC 3.15181 | Lithocarpusglabra | China | KC153096 | NA | NA | KC153087 | KF576312 |
| D.malorum | CAA 734 | Malusdomestica | Portugal | KY435638 | KY435658 | KY435648 | KY435627 | KY435668 |
| D.masirevicii | BRIP 54256 | Glycinemax | Australia | KJ197277 | NA | NA | KJ197238 | KJ197256 |
| D.mayteni | CBS 133185 | Maytenusilicifolia | Brazil | KC343139 | KC343381 | KC343623 | KC343865 | KC344107 |
| D.maytenicola | CPC 21896 | Maytenusacuminata | South Africa | KF777157 | NA | NA | NA | KF777250 |
| D.mediterranea | SAUCC194.111 | Machiluspingii | China | MT822639 | MT855718 | MT855606 | MT855836 | MT855951 |
| D.melastomatis | SAUCC194.55 | Melastomamalabathricum | China | MT822583 | MT855664 | MT855551 | MT855780 | MT855896 |
| D.melonis | CBS 435.87 | Glycinesoja | Indonesia | KC343141 | KC343383 | KC343625 | KC343867 | KC344109 |
| D.middletonii | BRIP 54884e | Rapistrumrugosum | Australia | KJ197286 | NA | NA | KJ197248 | KJ197266 |
| D.minima | CGMCC 3.20097 | Unknown | China | MT385953 | MT424722 | MW022496 | MT424688 | MT424708 |
| D.minusculata | CGMCC 3.20098 | Unknown | China | MT385957 | MW022475 | MW022499 | MT424692 | MT424712 |
| D.miriciae | BRIP 54736j | Helianthusannuus | Australia | KJ197282 | NA | NA | KJ197244 | KJ197262 |
| D.multigutullata | CFCC 53095 | Citrusmaxima | China | MK432645 | MK442967 | MK442992 | MK578121 | MK578048 |
| D.multigutullata | CFCC 53096 | Citrusmaxima | China | MK432646 | MK442968 | MK442993 | MK578122 | MK578049 |
| D.musigena | CBS 129519 | Musa | Australia | KC343143 | KC343385 | KC343267 | KC343869 | KC344111 |
| D.neoarctii | CBS 109490 | Ambrosiatrifida | USA | KC343145 | KC343387 | KC343629 | KC343871 | KC344113 |
| D.neoraonikayaporum | MFLUCC 14-1136 | Tectonagrandis | Thailand | KU712449 | KU749356 | NA | KU749369 | KU743988 |
| D.nothofagi | BRIP 54801 | Nothofaguscunninghamii | Australia | JX862530 | NA | NA | JX862536 | KF170922 |
| D.novem | CBS 127269 | Glycinemax | Croatia | KC343155 | KC343397 | KC343639 | KC343881 | KC344123 |
| D.ocoteae | CPC 26217 | Ocoteabullata | France | KX228293 | NA | NA | NA | KX228388 |
| D.oraccinii | LC3166 | Camelliasinensis | China | KP267863 | NA | KP293517 | KP267937 | KP293443 |
| D.ovalispora | ZJUD93 | Citruslimon | China | KJ490628 | NA | KJ490570 | KJ490507 | KJ490449 |
| D.ovoicicola | CGMCC 3.17093 | Lithocarpusglabra | China | KF576265 | KF576223 | NA | KF576240 | KF576289 |
| D.oxe | CBS 133186 | Maytenusilicifolia | Brazil | KC343164 | KC343406 | KC343648 | KC343890 | KC344132 |
| D.padina | CFCC 52590 | Padusracemosa | China | MH121525 | MH121443 | MH121483 | MH121567 | MH121604 |
| D.padina | CFCC 52591 | Padusracemosa | China | MH121526 | MH121444 | MH121484 | MH121568 | MH121605 |
| D.pandanicola | MFLUCC 17-0607 | Pandanaceae | Thailand | MG646974 | NA | NA | NA | MG646930 |
| D.paranensis | CBS 133184 | Maytenusilicifolia | Brazil | KC343171 | KC343413 | KC343655 | KC343897 | KC344139 |
| D.parapterocarpi | CPC 22729 | Pterocarpusbrenanii | Zambia | KJ869138 | NA | NA | NA | KJ869248 |
| D.parvae | PSCG 035 | Pyrusbretschneideri | China | MK626920 | MK691169 | MK726211 | MK654859 | MK691249 |
| D.pascoei | BRIP 54847 | Perseaamericana | Australia | MK111097 | NA | NA | JX862538 | KF170924 |
| D.passiflorae | CPC 19183 | Passifloraedulis | Netherlands | JX069860 | NA | NA | NA | NA |
| D.passifloricola | CPC 27480 | Passiflorafoetida | Malaysia | KX228292 | NA | KX228367 | NA | KX228387 |
| D.penetriteum | LC3215 | Camelliasinensis | China | KP267879 | NA | NA | KP293532 | KP267953 |
| D.perjuncta | CBS 109745 | Ulmusglabra | Austria | KC343172 | KC343414 | KC343656 | KC343898 | KC344140 |
| D.perseae | CBS 151.73 | Perseagratissima | Netherlands | KC343173 | KC343415 | NA | NA | NA |
| D.pescicola | MFLUCC 16-0105 | Prunuspersica | China | KU557555 | KU557603 | NA | KY400831 | KU557579 |
| D.phaseolorum | AR4203 | Phaseolusvulgaris | USA | KJ590738 | KJ612135 | KJ659220 | KJ590739 | KJ610893 |
| D.phillipsii | CAA 817 | Vacciniumcorymbosum | Portugal | MK792305 | MK883831 | MK871445 | MK828076 | MN000351 |
| D.podocarpi-macrophylli | LC6155 | Podocarpusmacrophyllus | Japan | KX986774 | KX999278 | KX999246 | KX999167 | KX999207 |
| D.pometiae | SAUCC194.72 | Pometiapinnata | China | MT822600 | MT855679 | MT855568 | MT855797 | MT855912 |
| D.pseudoalnea | CFCC 54190 | Alnusglutinosa | Netherlands | MZ727037 | MZ753468 | MZ781302 | MZ816343 | MZ753487 |
| D.pseudoalnea | M2A | Alnusglutinosa | Netherlands | MZ727038 | MZ753469 | MZ753478 | MZ816344 | MZ753488 |
| D.pseudomangiferae | CBS 101339 | Mangiferaindica | Dominican Republic | KC343181 | KC343423 | KC343665 | KC343907 | KC344149 |
| D.pseudophoenicicola | CBS 176.77 | Mangiferaindica | Iraq | KC343183 | KC343425 | KC343667 | KC343909 | KC344151 |
| D.pseudotsugae | MFLU 15-3228 | Pseudotsugamenziesii | Italy | KY964225 | KY964138 | NA | KY964181 | KY964108 |
| D.psoraleae | CPC 21634 | Psoraleapinnata | South Africa | KF777158 | NA | NA | KF777245 | KF777251 |
| D.psoraleae-pinnatae | CPC 21638 | Psoraleapinnata | South Africa | KF777159 | NA | NA | NA | KF777252 |
| D.pterocarpicola | MFLUCC 10-0580a | Pterocarpusindicus | Thailand | JQ619887 | JX197433 | NA | JX275403 | JX275441 |
| D.pungensis | SAUCC194.112 | Elaeagnuspungens | China | MT822640 | MT855719 | MT855607 | MT855837 | MT855952 |
| D.pyracanthae | CAA483 | Pyracanthacoccinea | Portugal | KY435635 | KY435645 | KY435656 | KY435625 | KY435666 |
| D.racemosae | CPC 26646 | Euclearacemosa | South Africa | MG600223 | MG600219 | MG600221 | MG600225 | MG600227 |
| D.raonikayaporum | CBS 133182 | Spondiasmombin | Brazil | KC343188 | KC343430 | KC343672 | KC343914 | KC344156 |
| D.ravennica | MFLUCC 16-0997 | Clematisvitalba | Italy | NA | NA | NA | MT394670 | NA |
| D.rhusicola | CPC 18191 | Rhuspendulina | South Africa | JF951146 | NA | NA | NA | NA |
| D.rosae | MFLUCC 17-2658 | Rosa | United Kingdom | MG828894 | MG829273 | NA | NA | MG843878 |
| D.rosiphthora | COAD 2914 | Rosa | Brazil | MT311197 | MT313691 | NA | MT313693 | NA |
| D.rossmaniae | CAA 762 | Vacciniumcorymbosum | Portugal | MK792290 | MK883822 | MK871432 | MK828063 | MK837914 |
| D.rostrata | CFCC 50062 | Juglansmandshurica | China | KP208847 | KP208849 | KP208851 | KP208853 | KP208855 |
| D.rostrata | CFCC 50063 | Juglansmandshurica | China | KP208848 | KP208850 | KP208852 | KP208854 | KP208856 |
| D.rudis | AR3422 | Laburnumanagyroides | Austria | KC843331 | KC843146 | NA | KC843090 | KC843177 |
| D.rudis | CFCC 54193 | Quercusrobur | Netherlands | MZ727039 | MZ753470 | MZ753479 | MZ816345 | MZ753489 |
| D.rudis | M86 | Quercusrobur | Netherlands | MZ727040 | MZ753471 | MZ753480 | MZ816346 | MZ753490 |
| D.saccarata | CBS 116311 | Protearepens | South Africa | KC343190 | KC343432 | KC343674 | KC343916 | KC344158 |
| D.sackstonii | BRIP 54669b | Helianthusannuus | Australia | KJ197287 | NA | NA | KJ197249 | KJ197267 |
| D.salicicola | BRIP 54825 | Salixpurpurea | Australia | JX862531 | NA | NA | JX862537 | KF170923 |
| D.sambucusii | CFCC 51986 | Sambucuswilliamsii | China | KY852495 | KY852499 | KY852503 | KY852507 | KY852511 |
| D.sambucusii | CFCC 51987 | Sambucuswilliamsii | China | KY852496 | KY852500 | KY852504 | KY852508 | KY852512 |
| D.schimae | CFCC 53103 | Schimasuperba | China | MK442640 | MK442962 | MK442987 | MK578116 | MK578043 |
| D.schimae | CFCC 53104 | Schimasuperba | China | MK442641 | MK442963 | MK442988 | MK578117 | MK578044 |
| D.schimae | CFCC 53105 | Schimasuperba | China | MK442642 | MK442964 | MK442989 | MK578118 | MK578045 |
| D.schini | CBS 133181 | Schinusterebinthifolius | Brazil | KC343191 | KC343433 | KC343675 | KC343917 | KC344159 |
| D.schisandrae | CFCC 51988 | Schisandrachinensis | China | KY852497 | KY852501 | KY852505 | KY852509 | KY852513 |
| D.schisandrae | CFCC 51989 | Schisandrachinensis | China | KY852498 | KY852502 | KY852506 | KY852510 | KY852514 |
| D.schoeni | MFLU 15-1279 | Schoenusnigricans | Italy | KY964226 | KY964139 | NA | KY964182 | KY964109 |
| D.sclerotioides | CBS 296.67 | Cucumissativus | Netherlands | MH858974 | KC343435 | KC343677 | KC343919 | KC344161 |
| D.searlei | CBS 146456 | Macadamia | Australia | MN708231 | NA | NA | NA | MN696540 |
| D.sennae | CFCC 51636 | Sennabicapsularis | China | KY203724 | KY228875 | NA | KY228885 | KY228891 |
| D.sennae | CFCC 51637 | Sennabicapsularis | China | KY203725 | KY228876 | NA | KY228886 | KY228892 |
| D.sennicola | CFCC 51634 | Sennabicapsularis | China | KY203722 | KY228873 | KY228879 | KY228883 | KY228889 |
| D.sennicola | CFCC 51635 | Sennabicapsularis | China | KY203723 | KY228874 | KY228880 | KY228884 | KY228890 |
| D.serafiniae | BRIP 55665a | Helianthusannuus | Australia | KJ197274 | NA | NA | KJ197236 | KJ197254 |
| D.shaanxiensis | CFCC 53106 | on branches of liana | China | MK432654 | MK442976 | MK443001 | MK578130 | NA |
| D.shaanxiensis | CFCC 53107 | on branches of liana | China | MK432655 | MK432977 | MK432002 | MK578131 | NA |
| D.siamensis | MFLUCC 10-0573a | Dasymaschalon | Thailand | NA | JQ619897 | NA | JX275393 | JX275429 |
| D.silvicola | CFCC 54191 | Fraxinusexcelsior | Netherlands | MZ727041 | MZ753472 | MZ753481 | MZ816347 | MZ753491 |
| D.silvicola | M79 | Fraxinusexcelsior | Netherlands | MZ727042 | MZ753473 | MZ753482 | MZ816348 | MZ753492 |
| D.sojae | FAU635 | Glycinemax | USA | KJ590719 | KJ612116 | KJ659208 | KJ590762 | KJ610875 |
| D.spartinicola | CPC 24951 | Spartium junceμm | Spain | KR611879 | NA | KR857696 | NA | KR857695 |
| D.spinosa | PSCG 383 | Pyruspyrifolia | China | MK626849 | MK691129 | MK726156 | MK654811 | MK691234 |
| D.sterilis | CBS 136969 | Vacciniumcorymbosum | Italy | KJ160579 | KJ160548 | MF418350 | KJ160611 | KJ160528 |
| D.stictica | CBS 370.54 | Buxussampervirens | Italy | KC343212 | KC343454 | KC343696 | KC343938 | KC344180 |
| D.subclavata | ZJUD95 | Citrusunshiu | China | KJ490630 | NA | KJ490572 | KJ490509 | KJ490451 |
| D.subcylindrospora | KUMCC 17-0151 | Unknown | China | MG746629 | NA | NA | MG746630 | MG746631 |
| D.subellipicola | KUMCC 17-0153 | Unknown | China | MG746632 | NA | NA | MG746633 | MG746634 |
| D.subordinaria | CBS 464.90 | Plantagolanceolata | South Africa | KC343214 | KC343456 | KC343698 | KC343940 | KC344182 |
| D.taoicola | MFLUCC 16-0117 | Prunuspersica | China | KU557567 | NA | NA | KU557636 | KU557591 |
| D.tectonae | MFLUCC 12-0777 | Tectonagrandis | Thailand | KU712430 | KU749345 | NA | KU749359 | KU743977 |
| D.tectonendophytica | MFLUCC 13-0471 | Tectonagrandis | Thailand | KU712439 | KU749354 | NA | KU749367 | KU743986 |
| D.tectonigena | MFLUCC 12-0767 | Camelliasinensis | China | KX986782 | KX999284 | KX999254 | KX999174 | KX999214 |
| D.terebinthifolii | CBS 133180 | Schinusterebinthifolius | Brazil | KC343216 | KC343458 | KC343700 | KC343942 | KC344184 |
| D.ternstroemia | CGMCC 3.15183 | Ternstroemiagymnanthera | China | KC153098 | NA | NA | KC153089 | NA |
| D.thunbergii | MFLUCC 10-0576a | Thunbergialaurifolia | Thailand | JQ619893 | JX197440 | NA | JX275409 | NA |
| D.thunbergiicola | MFLUCC 12-0033 | Thunbergialaurifolia | Thailand | KP715097 | NA | NA | KP715098 | NA |
| D.tibetensis | CFCC 51999 | Juglandisregia | China | MF279843 | MF279888 | MF279828 | MF279858 | MF279873 |
| D.tibetensis | CFCC 52000 | Juglandisregia | China | MF279844 | MF279889 | MF279829 | MF279859 | MF279874 |
| D.torilicola | MFLUCC 17-1051 | Torilisarvensis | Italy | KY964212 | KY964127 | NA | KY964168 | KY964096 |
| D.toxica | CBS 534.93 | Lupinusangustifolius | Australia | KC343220 | KC343462 | KC343704 | KC343946 | KC344188 |
| D.tulliensis | BRIP 62248a | Theobromacacao | Australia | KR936130 | NA | NA | KR936133 | KR936132 |
| D.ueckerae | FAU656T | Cucumismelo | USA | KJ590726 | KJ612122 | KJ659215 | KJ590747 | KJ610881 |
| D.ukurunduensis | CFCC 52592 | Acerukurunduense | China | MH121527 | MH121445 | MH121485 | MH121569 | NA |
| D.ukurunduensis | CFCC 52593 | Acerukurunduense | China | MH121528 | MH121446 | MH121486 | MH121570 | NA |
| D.undulata | LC6624 | Unknown | China | KX986798 | NA | KX999269 | KX999190 | KX999230 |
| D.unshiuensis | ZJUD52 | Citrusunshiu | China | KJ490587 | NA | KJ490529 | KJ490466 | KJ490408 |
| D.unshiuensis | CFCC 52594 | Caryaillinoensis | China | MH121529 | MH121447 | MH121487 | MH121571 | MH121606 |
| D.unshiuensis | CFCC 52595 | Caryaillinoensis | China | MH121530 | MH121448 | MH121488 | MH121572 | MH121607 |
| D.vaccinii | CBS 160.32 | Oxycoccusmacrocarpos | USA | MH121502 | MH121426 | MH121462 | MH121544 | MH121584 |
| D.vangueriae | CBS 137985 | Vangueriainfausta | Zambia | KJ869137 | NA | NA | NA | KJ869247 |
| D.vawdreyi | BRIP 57887a | Psidiumguajava | Australia | KR936126 | NA | NA | KR936129 | KR936128 |
| D.velutina | LC4421 | Neolitsea | China | KX986790 | NA | KX999261 | KX999182 | KX999223 |
| D.verniciicola | CFCC 53109 | Verniciamontana | China | MK573944 | MK574583 | MK574599 | MK574619 | MK574639 |
| D.verniciicola | CFCC 53110 | Verniciamontana | China | MK573945 | MK574584 | MK574600 | MK574620 | MK574640 |
| D.viniferae | JZB320071 | Vitisvinifera | China | MK341551 | MK500119 | NA | MK500107 | MK500112 |
| D.virgiliae | CMW 40748 | Virgiliaoroboides | South Africa | KP247556 | NA | NA | NA | KP247575 |
| D.xishuangbanica | LC6707 | Camelliasinensis | China | KX986783 | NA | KX999255 | KX999175 | KX999216 |
| D.xunwuensis | CFCC 53085 | Unknown | China | MK432663 | MK442983 | MK443008 | MK578137 | MK578063 |
| D.xunwuensis | CFCC 53086 | Unknown | China | MK432664 | MK442984 | MK443009 | MK578138 | MK578064 |
| D.yunnanensis | LC6168 | Unknown | China | KX986796 | KX999290 | KX999267 | KX999188 | KX999228 |
| D.zaobaisu | PSCG 031 | Pyrusbretschneideri | China | MK626922 | NA | MK726207 | MK654855 | MK691245 |
| Diaporthellacorylina | CBS 121124 | Corylus | NA | KC343004 | KC343246 | KC343488 | KC343730 | KC343972 |
Note: NA, not applicable. Strains in this study are marked in bold.