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. Author manuscript; available in PMC: 2022 Dec 1.
Published in final edited form as: Curr Opin Struct Biol. 2021 Jul 7;71:79–86. doi: 10.1016/j.sbi.2021.05.014

Table 1.

Structures of the RAG recombinase, protoRAG and Transiba

apo PRC NFC HFC SEC/TEC/TCC STC
Mouse RAG 4WWX (3.2 Å) 6CIK (3.15 Å)
6OEM (3.6 Å)/20030
6OER (3.3 Å)/20033
6OEP (3.7 Å)/20034b
5ZE0 (2.75 Å)
5ZE1 (3.0 Å)
6CG0 (3.17 Å)/7470
5ZE2 (3.3 Å)c
6XNZ (3.8 Å)/22274d
6XNY (2.9 Å)/22273
6OES (3.1 Å)/20036
Zebrafish RAG 6DBT (4.3 Å)/7849 6DBL (5.0 Å)/7845
6DBR (4.0 Å)/7848b
6DBI (3.4 Å)/7843 3JBX (3.4 Å)/6487e
protoRAG 7043 (5.3 Å)g 6B40 (4.3 Å)/7046
Transib 6PQN (3.0 1Å) 6PQU (3.3 Å)/20453 6PQX (4.6 Å)/20455 6PQY (4.2 Å)/20456f 6PRS (3.3 Å)/20457
a

PDB accession codes of crystal structures are colored in orange; PDB and EMDB accession codes of cryoEM structures are colored blue.

b

The model consists of a half of PRC and a half of NFC.

c

SEC (signal end complex) structure before the hairpin products are release.

d

TCC (target capture complex) with hairpin product replaced by target DNA for transposition.

e

SEC with the hairpins products replaced by blunt-end DNAs.

f

TEC (transposon end complex) structure, equivalent to SEC and with hairpin products released.

g

The structure coordinates are not available, and cryoEM map is deposited in EMDB.