Table 1.
apo | PRC | NFC | HFC | SEC/TEC/TCC | STC | |
---|---|---|---|---|---|---|
Mouse RAG | 4WWX (3.2 Å) |
6CIK (3.15 Å)
6OEM (3.6 Å)/20030 |
6OER (3.3 Å)/20033
6OEP (3.7 Å)/20034b |
5ZE0 (2.75 Å)
5ZE1 (3.0 Å) 6CG0 (3.17 Å)/7470 |
5ZE2 (3.3 Å)c
6XNZ (3.8 Å)/22274d |
6XNY (2.9 Å)/22273
6OES (3.1 Å)/20036 |
Zebrafish RAG | 6DBT (4.3 Å)/7849 |
6DBL (5.0 Å)/7845
6DBR (4.0 Å)/7848b |
6DBI (3.4 Å)/7843 | 3JBX (3.4 Å)/6487e | ||
protoRAG | 7043 (5.3 Å)g | 6B40 (4.3 Å)/7046 | ||||
Transib | 6PQN (3.0 1Å) | 6PQU (3.3 Å)/20453 | 6PQX (4.6 Å)/20455 | 6PQY (4.2 Å)/20456f | 6PRS (3.3 Å)/20457 |
PDB accession codes of crystal structures are colored in orange; PDB and EMDB accession codes of cryoEM structures are colored blue.
The model consists of a half of PRC and a half of NFC.
SEC (signal end complex) structure before the hairpin products are release.
TCC (target capture complex) with hairpin product replaced by target DNA for transposition.
SEC with the hairpins products replaced by blunt-end DNAs.
TEC (transposon end complex) structure, equivalent to SEC and with hairpin products released.
The structure coordinates are not available, and cryoEM map is deposited in EMDB.