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. 2021 Nov 4;20(12):5304–5314. doi: 10.1021/acs.jproteome.1c00532

Table 1. Overview of the Multiplex LC-MRM-MS Test Results.

parameter strategy desirable criteria performance results
selectivity and interferences proteotypic peptides per protein min. 2 two to three proteotypic peptides per protein
multiple MRM transitions per peptide min. 3 one quantifier and two qualifier product ions
ion ratio monitoring in biological matrix urine for agreement with SSS H0: μQual ratioSSS = μQual ratiourine no difference (p > 0.05), except for cubilin, TGF-β1, and calbindin
CV < 20% CV < 20%, except for cubilin, TGF-β1, and calbindin
carryover blank after SSS <1% ≤0.9% for all peptides
specimen-to-specimen carryover (EP10) carryover <3*low-low SD carryover < than error limit (pass)a
matrix effects (MEs) postextraction spiking of IS to asses matrix effect ion suppression in ESI absolute ME < 15% ±15% signal intensity reduction compared with signal in LC eluent A
area CV < 15% CV < 12% for all quantifier peptides
admixing samples with high total protein and hematuria samples r > 0.975 r ≥ 0.958, quantitation was not affected by proteinuria or hematuria
linearity admix sample low and sample high, N = 9 in triplicate r > 0.975 (range specified per measurand) r ≥ 0.975 for NGAL,TIMP2, KIM-1, NGAL, SLC22A2, and CXCL9; r = 0.824 for nephrin
by dilution of CAL1 (N = 5) in duplicate r > 0.975 r ≥ 0.995 for uromodulin and IGFBP7; no linear correlation obtained for cubilin and TGF-β1
peptide agreement r > 0.975 r ≥ 0.991 for NGAL,TIMP2, IGFBP7, KIM-1, nephrin, SLC22A2, CXCL9, and UMOD; no linear correlation obtained for cubilin and TGF-β1
imprecision within-run imprecision by measuring five QC samples in five replicates CVwr < 15% AV CV = 13.3% for NGAL, 4.7% for IGFBP7, 11.4% for KIM-1, 9.7% for TIMP2, 8.2% for nephrin, 8.3% for CXCL9, 34.2% for SLC22A2, 15.1% for UMOD, 19.6% for TGF-β1, and 20.3% for cubilin
total imprecision by measuring five QC samples in five replicates over 5 days CVtot < 15% average CVtot = ±26% depending on the measurand and concentration level
a

No data for peptides from TGF-β1 or cubilin due to poor response (S/N < 10) in urine of healthy individuals. AV, average over five QC samples; CVwr, within-run imprecision; CVtot, total imprecision; CV, coefficient of variance; r, Pearson’s r in linear regression.