Skip to main content
. Author manuscript; available in PMC: 2022 Nov 16.
Published in final edited form as: Biochemistry. 2021 Nov 2;60(45):3362–3373. doi: 10.1021/acs.biochem.1c00589

Table 1.

Kinetic Parameters for Wild Type and Variant OMPDC-Catalyzed Decarboxylation of OMP and EO at 25 °C.

Enzyme OMPa EOb EO + HPib
kcat/Km
(M−1 s−1)c
ΔΔG
(kcal/mol)d
(kcat/Km)E
(M−1 s−1)
ΔΔG
(kcal/mol)d
(kcat/Km)E•HPi/Kd
(M−2 s−1)
ΔΔG
(kcal/mol)d
WT 1.1 × 107 0.026e 1.2 × 104 e
D37G 3.2 × 105 2.1 (2.7 ± 0.1) × 10−3 f 1.4 290 g 2.2
T100’A 2.1 × 105 2.3 (2.3 ± 0.1) × 10−3 f 1.4 85 g 2.9
a

At pH 7.1 (30 mM MOPS) and I = 0.105 (NaCl).

b

Rate constant defined in Scheme 2.

c

Published kinetic parameters.14

d

The effect of the side chain substitution on the activation barrier for the reaction catalyzed by wild type OMPDC.

e

Published kinetic parameter.18

f

Average of two determinations at pH 7.0 (25 mM MOPS) and I = 0.14 (NaCl).

g

Determined from the fit of data shown in Figure 2 to eq 2.