TABLE 2.
Molecular characteristics of 22 MDR S. pneumoniae isolates from Korea
| Strain no. | PFGE pattern | Ribotype | Fingerprint profile of:
|
pbp 2b sequence
|
|||
|---|---|---|---|---|---|---|---|
| pbp 1a | pbp 2x | pbp 2b | Nucleotide variation (%) | Amino acid variation (%) | |||
| Sp 23Fa | A | NDb | I | I | I | 5.4 | 2.5 |
| 1 | A | 3 | I | I | I | ND | ND |
| 2 | A | 1 | I | I | I | ND | ND |
| 3 | A | 1 | I | I | I | 5.4 | 3.0 |
| 4 | A | 1 | I | I | I | ND | ND |
| 5 | A | 1 | I | I | I | ND | ND |
| 6 | A | 4 | I | I | I | ND | ND |
| 7 | A | 1 | I | I | I | ND | ND |
| 8 | A | 1 | I | I | I | 5.4 | 3.0 |
| 9 | A | 1 | I | I | I | 5.6 | 3.0 |
| 10 | A | 1ac | I | I | I | 5.4 | 3.0 |
| 11 | A | 1 | I | I | I | ND | ND |
| 12 | A | 6 | III | I | I | ND | ND |
| 13 | A | 1a | I | I | I | ND | ND |
| 14 | A | 1a | I | I | I | ND | ND |
| 15 | A | 1a | I | I | I | 5.6 | 3.0 |
| 16 | B | 7 | II | II | II | 5.4 | 3.0 |
| 17 | A | 1b | I | III | I | ND | ND |
| 18 | A | 1 | I | III | I | 5.6 | 3.4 |
| 19 | B | 4 | IV | IV | III | 6.8 | 3.4 |
| 20 | C | 5 | IV | IV | IV | 7.8 | 4.3 |
| 21 | D | 5a | V | I | IV | ND | ND |
| 22 | A | 2 | I | I | I | ND | ND |
Sp23 F, Spanish 23F clone.
ND, not done.
1a indicates the subtype of the ribopattern which differed by only one band from original ribotype 1.