Key resources table.
| Reagent type (species) or resource | Designation | Source or reference | Identifiers | Additional information |
|---|---|---|---|---|
| Cell line (Homo sapiens, male) | PC9 | Sigma-Aldrich | cat# 90071810;RRID:CVCL_B260 | lot# 14A030 |
| Chemical compound, drug | erlotinib | Cayman Chemical | cat# 10,483 | lot# 0459700-31 |
| Chemical compound, drug | erlotinib-HCl | LC Laboratories | cat# E-4007 | lot# BBE-108 |
| Software, algorithm | Cellometer Auto T4 Software | Nexcelom Bioscience | RRID:SCR_021656 | Version 3.1.1 |
| Software, algorithm | Image Studio Software | LI-COR Biosciences | RRID:SCR_015795 | |
| Antibody | rabbit-anti-phospho-EGFR (Y1068) | Cell Signaling Technology | cat# 3777; clone D7A5;RRID:AB_2096270 | 1:1000 dilution |
| Antibody | mouse anti-GAPDH | Thermo Fisher Scientific | cat# MA5-15738; clone GA1R; RRID:AB_10977387 | 1:2000 dilution |
| Antibody | IRDye 680RD-conjugated donkey anti-mouse | LI-COR Biosciences | cat# 926-68072;RRID:AB_10953628 | 1:15,000 dilution |
| Antibody | IRDye 800CW-conjugated donkey anti-rabbit | LI-COR Biosciences | cat# 926-32213;RRID:AB_621848 | 1:15,000 dilution |
| Software, algorithm | 2,100 Bioanalyzer Software | Agilent Technologies | RRID:SCR_019389 | Version 1.03 |
| Cell line (Homo sapiens, male) | U87MG | ATCC | cat#HTB-14; RRID:CVCL_0022 | |
| Cell line (Homo sapiens, male) | HMVEC | Lonza | CC-2516 | |
| Cell line (Homo sapiens, male) | GSC83 | doi:10.1038/nature09557 | RRID:CVCL_A9TL | Shared by Ricci-Vitiani lab, Istituto Superiore di Sanità |
| Cell line (Homo sapiens, female) | HMEC | Applied Biological Materials | cat# T0454; RRID:CVCL_B0CI | lot# RZ824921; infected with SV40 large T and small T antigen |
| Recombinant DNA reagent | pRetroX-IRES-ZsGreen1-empty vector | Clontech | cat# 632,520 | |
| Recombinant DNA reagent | pRetroX-FLAG-GNAO1WT-IRES-ZsGreen1 | This paper | ||
| Recombinant DNA reagent | pRetroX-FLAG-GNAO1R243H-IRES-ZsGreen1 | This paper | ||
| Cell line (Homo sapiens, female) | Phoenix | ATCC | cat# CRL-3213; RRID:CVCL_H716 | |
| Antibody | mouse anti-FLAG | Sigma-Aldrich | cat# F1804; clone M2; RRID:AB_262044 | 1:500 dilution |
| Antibody | mouse anti-β-ACTIN | Sigma-Aldrich | cat# A5441; clone AC-15; RRID:AB_476744 | 1:1000 dilution |
| Antibody | HRP-conjugated rabbit anti-mouse | Abcam | cat# ab6728; RRID:AB_955440 | 1:10,000 dilution |
| Software, algorithm | FACSDiva | BD Biosciences | RRID:SCR_016722 | Version 6.1.2 |
| Software, algorithm | ImageJ | doi:10.1038/nmeth.2089 | RRID:SCR_003070 | Version 1.51p |
| Cell line (Homo sapiens, female) | D04 | ABN Cell Line Bank, QIMR Berghofer Medical Research Institute |
RRID:CVCL_H604 | |
| Cell line (Homo sapiens, female) | A375 | ATCC | cat# CRL-1619; RRID:CVCL_0132 | |
| Chemical compound, drug | sorafenib | Selleckchem | cat# S7397 | |
| Chemical compound, drug | SB590885 | Selleckchem | cat# S2220 | |
| Chemical compound, drug | PD184352 | Selleckchem | cat# S1020 | |
| Antibody | mouse anti-phospho-ERK1/2 (T202/Y204) | Cell Signaling Technology |
cat# 9106; clone E10; RRID:AB_331768 | 1:1000 dilution |
| Antibody | Rabbit anti-ERK1/2 | Cell Signaling Technology |
cat# 9102; RRID:AB_330744 | 1:1000 dilution |
| Cell line (Homo sapiens, female) | RPMI-7951 | ATCC | cat# HTB-66; RRID:CVCL_1666 | |
| Cell line (Homo sapiens, male) | OUMS-23 | JCRB | cat# JCRB1022; RRID:CVCL_3088 | |
| Cell line (Homo sapiens, female) | HT-29 | ATCC | cat# HTB-38; RRID:CVCL_0320 | |
| Chemical compound, drug | PLX4720 | Selleckchem | cat# S1152 | |
| Chemical compound, drug | MAP3K8 kinase inhibitor | EMD Millipore | cat# 616,373 | |
| Antibody | rabbit anti-phospho MEK1/2 (S217/221) | Cell Signaling Technology |
cat# 9154; clone 41G9; RRID:AB_2138017 | 1:1000 dilution |
| Antibody | mouse anti-ERK1/2 | Cell Signaling Technology |
cat# 4696; clone L34F12; RRID:AB_390780 | 1:1000 dilution |
| Antibody | rabbit anti-MEK1/2 | Cell Signaling Technology |
cat# 8727; clone D1A5; RRID:AB_10829473 | 1:1000 dilution |
| Antibody | rabbit anti-Vinculin | Sigma-Aldrich | cat# V4139; RRID:AB_262053 | 1:20,000 dilution |
| Antibody | HRP-conjugated goat anti-rabbit | Cell Signaling Technology |
cat# 7074; RRID:AB_2099233 | 1:1000 dilution |
| Antibody | HRP-conjugated horse anti-mouse | Cell Signaling Technology |
cat# 7076; RRID:AB_330924 | 1:1000 dilution |
| Strain, strain background (M. musculus, C.BKa-lghb/lcrCrl, female) | C.B-17 wild-type | Charles River | RRID:IMSR_CRL:251 | |
| Strain, strain background (M. musculus, CB17.Cg-PrkdcscidLystbg/Crl, female) | SCID/beige | Charles River | RRID:IMSR_CRL:250 | |
| Strain, strain background (M. musculus, C57BL/6 J, female) | BL/6 wild-type | The Jackson Laboratory |
RRID:IMSR_JAX:000664 | |
| Strain, strain background (M. musculus, B6.129S2-Cd4tm1Mak/J, female) | CD4−/− | The Jackson Laboratory |
RRID:IMSR_JAX:002663 | |
| Recombinant DNA reagent | pPGK-SB13 | doi:10.1038/nature10599 | Shared by Zender lab, University of Tuebingen | |
| Recombinant DNA reagent | pT/CaggsNrasG12V | doi:10.1038/nature10599 | Shared by Zender lab, University of Tuebingen | |
| Recombinant DNA reagent | pT/CaggsNrasG12V/D38A | doi:10.1038/nature10599 | Shared by Zender lab, University of Tuebingen | |
| Antibody | mouse anti-p16 | Abcam | cat# ab54210; clone 2D9A12; RRID:AB_881819 | 1:50 dilution |
| Antibody | mouse anti-p21 | BD Biosciences | cat# 556431; clone SXM30; RRID:AB_396415 | 1:50 dilution |
| Antibody | mouse anti-Nras | Santa Cruz Biotechnology |
cat# sc-31; clone F155; RRID:AB_628041 | 1:100 dilution |
| Antibody | mouse IgG1 isotype control | Sigma-Aldrich | cat# M5284; clone MOPC21; RRID:AB_1163685 | 1:50 dilution |
| Antibody | biotinylated goat anti-mouse | Thermo Fisher Scientific | ted goat anti-mouse (Thermo Fisher Scientific) | |
| Software, algorithm | CaseViewer | 3DHISTECH | RRID:SCR_017654 | Version 2.2 |
| Cell line (Homo sapiens, female) | HEK293T | ATCC | cat# CRL-3216; RRID:CVCL_0063 | |
| Cell line (M. musculus, male) | 3T3-L1 | ATCC | cat# CL-173; RRID:CVCL_0123 | |
| Recombinant DNA reagent | pLPC empty vector | This paper | ||
| Recombinant DNA reagent | pLPC-IDH1 wildtype | This paper | ||
| Recombinant DNA reagent | pLPC-IDH1R132H | This paper | ||
| Recombinant DNA reagent | pLPC-IDH2 wildtype | This paper | ||
| Recombinant DNA reagent | pLPC-IDH2R172K | This paper | ||
| Antibody | rabbit anti-H3 | Cell Signaling Technology, |
cat# 4499; clone D1H2; RRID:AB_10544537 | 1:1000 dilution |
| Antibody | rabbit anti-H3K4me3 | Millipore | cat# 17–614; RRID:AB_11212770 | 1:2000 dilution |
| Antibody | rabbit anti-H3K36me3 | Abcam | cat# ab9050; RRID:AB_306966 | 1 µg/ml dilution |
| Antibody | rabbit anti-H3K79me2 | Cell Signaling Technology |
cat# 9757; RRID:AB_2118448 | 1:1000 dilution |
| Antibody | rabbit anti-H3K9me2 | Cell Signaling Technology |
cat# 9753; RRID:AB_659848 | 1:1000 dilution |
| Antibody | rabbit anti-H3K9me3 | Abcam | cat# ab8898; RRID:AB_306848 | 1 µg/ml dilution |
| Antibody | rabbit anti-IDH1 | Proteintech | cat# 12332-1-AP; RRID:AB_2123159 | 1:1500 dilution |
| Antibody | mouse anti-IDH2 | Abcam | cat# ab55271; clone 5F11; RRID:AB_943793 | 1 µg/ml dilution |
| Software, algorithm | R project for statistical computing | https://www.r-project.org | RRID:SCR_001905 | Version 4.1.0 |
| Software, algorithm | metafor | doi:10.18637/jss.v036.i03 | RRID:SCR_003450 | Version 3.0-2 |