Table-5A.

16S rRNA gene sequences of the strong DNA bands from stomach of native pigs detected by DGGE and cloning technique.

S. No.	Code of DNA bands	Species	ID number	Identity (%)	E-value	DNA length (bp)	Diet
							LFD	HFC	HFB
1	d17	Lactobacillus delbrueckii subsp. bulgaricus	CP000156	98	8e-93	194	X	X	X
2	d1, d19	Lactobacillus spp. Lactobacillus equicursoris	FR681900 AB290830	99	2e-94	194	O	O	X
3	d3, d10, d15	Lactobacillus helveticus Lactobacillus gallinarum Lactobacillus crispatus Lactobacillus amylovorus Lactobacillus acidophilus	JF728275 AB596947 HQ718591 CP002338 CP000156	100	4e-96	194	X	X	X
4	d6	Lactobacillus mucosae	FR693800	100	4e-96	194	X	X	X
5	d2, d5, d7, d8, d9, d18	Megasphaera elsdenii	EU728750	100	2e-93	194	X	X	X
6	d12, d16	Prevotella ruminicola	AF218618	97	4e-86	189	X	X	X
7	d11, d13	Prevotella spp.	EU728713	96	2e-83	189	X	X	X
8	d14, d20	Selenomonas spp.	CP002559	97	5e-90	193	X	X	X

X: Detected, O: Non-detected. LFD=Low fiber diet, HFC=High fiber diet containing cassava by-products, HFB=High fiber diet containing brewer’s grain