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. 2021 Dec 2;7(12):e08519. doi: 10.1016/j.heliyon.2021.e08519

Table 1.

Downregulated miRNAs contain m6A consensus sequences.

Cells
miRNA Read Base Mean Sequence FC P-value Adjusted P-value
miR-125b-5p 360.877 UCCCUGAGACCCUAACUUGUGA -1.7 5.07E-09 2.91E-06
miR-100-5p 1252.25 AACCCGUAGAUCCGAACUUGUG -1.7 3.7E-08 1.06E-05
let-7e-5p 410.781 UGAGGUAGGAGGUUGUAUAGUUgaggaggaca -1.3 1.91E-06 0.00036
miR-4521 114.646 GCUAAGGAAGUCCUGUGCUCAGuuuuguagcaucaaaacu -1.0 6.32E-05 0.008
miR-142-5p 121.025 CAUAAAGUAGAAAGCACUACU -1.2 7.13E-05 0.008
miR-146a-5p 149.772 UGAGAACUGAAUUCCAUGGGUU -1.0 9.86E-05 0.009
miR-99b-5p 844.702 CACCCGUAGAACCGACCUUGCG -1.2 0.00017868 0.015
miR-125a-5p 1040.74 UCCCUGAGACCCUUUAACCUGUGA -1.0 0.00045275 0.026
miR-135b-5p 127.410 UAUGGCUUUUCAUUCCUAUGUGAuugcugucccaaacu -1.1 0.00238943 0.099
miR-32-5p
241.298
UAUUGCACAUUACUAAGUUGCA
-1.0
0.0222186
0.308
EVs

miRNA
Expression Level
Sequence
FC
P-value
Adjusted P-value
miR-100-5p 1252.25 AACCCGUAGAUCCGAACUUGUG -1.5 1.09E-06 0.00074
miR-99b-5p 844.702 CACCCGUAGAACCGACCUUGCG -1.4 1.07E-05 0.003
miR-193b-3p 582.185 AACUGGCCCUCAAAGUCCCGCU -1.0 1.39E-05 0.003
miR-125b-5p 360.877 UCCCUGAGACCCUAACUUGUGA -1.2 7.31E-05 0.001
let-7e-5p 410.781 UGAGGUAGGAGGUUGUAUAGUUgaggaggaca -1.1 0.00014876 0.011
miR-125a-5p 1040.74 UCCCUGAGACCCUUUAACCUGUGA -1.2 0.00020023 0.013
miR-224-5p 1469.11 UCAAGUCACUAGUGGUUCCGUUUAG -1.0 0.00274813 0.098

Downregulated miRNAs in METTL3 knockdown cells and EVs compared to DKO-1 cells and EVs. Expression levels (Read Base Mean) are the average number of RNAseq reads from 3 independent libraries. The sequence of downregulated miRNAs is shown along with the log2 fold change (FC), p-values, and adjusted p-values when comparing cell and EV levels between METTL3 knockdown cells and control DKO-1 cells after DESeq2 normalization. Highlighted in red are the m6A consensus sequences present in the mature miRNA sequence (upper case) or the immediately adjacent loop sequence in the pre-miRNA.