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. 2021 Dec 8;12:7131. doi: 10.1038/s41467-021-27449-4

Fig. 3. Lateral seam dynamics of the BAM from MD simulations.

Fig. 3

a Snapshots showing notable conformational state transitions observed in MD simulations. b Moving average of the hydrogen bonds between the backbones of BamA lateral seam strands. Plots are from three independent 6-μs simulations demonstrating a range of possible dynamics. c Snapshot of the BamA β-barrel from the second replica of BAMΔΒ(out) highlighting a single backbone hydrogen bond formed between residues Y432 and I806.