Table 2.
Ka/Ks analysis of TPS genes in C. faberi.
| Gene pairs | Ka1 | Ks2 | Ka/Ks3 Ratio | Date (Mya) |
|---|---|---|---|---|
| CfTPS5-CfTPS12 | 0.036349 | 0.060903 | 0.596841353 | 3.346319222 |
| CfTPS18-CfTPS22 | 0.183699 | 0.58801 | 0.31240786 | 32.30822426 |
| CfTPS27-CfTPS28 | 0.061668 | 0.086265 | 0.71486064 | 4.739845716 |
| CfTPS15-CfTPS23 | 0.040242 | 0.038395 | 1.048087536 | 2.109640277 |
| CfTPS3-CfTPS10 | 0.329855 | 1.100284 | 0.299790513 | 60.45518349 |
| CfTPS20-CfTPS7 | 0.035647 | 0.054369 | 0.655636934 | 2.987330286 |
| CfTPS25-CfTPS8 | 0.052051 | 0.057777 | 0.900881064 | 3.174578759 |
| CfTPS1-CfTPS2 | 0 | 0.01373 | 0 | 0.754415417 |
| CfTPS13-CfTPS16 | 0.207258 | 0.585853 | 0.353772093 | 32.1897194 |
| CfTPS11-CfTPS29 | 0.108769 | 0.203168 | 0.535365599 | 11.16305388 |
| CfTPS14-CfTPS30 | 0.035698 | 0.0446 | 0.800403031 | 2.450539375 |
| CfTPS24-CfTPS32 | 0.028484 | 0.045777 | 0.622244514 | 2.515215271 |
| CfTPS21-CfTPS26 | 0.04343 | 0.044138 | 0.983976748 | 2.425138016 |
Ka, non-synonymous rate.
Ks, synonymous substitution.
Ka/Ks, evolutionary constraint.
Divergence time (T) was calculated by using the formula T=Ks/(2×9.1×10−9)×10−6 million years ago (Mya, Zhang et al., 2018). The details of Ka/Ks calculation are listed in Supplementary Table S8.