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. 2021 Dec 1;13(23):6065. doi: 10.3390/cancers13236065

Table 2.

Best classifiers’ cross-validation and test set performances, as well as the difference between cross-validation and test set performance, Δ. The performance columns are colour coded from highest value in green, to lowest value in white. The Δ columns are colour coded from lowest value in green to highest value in red.

Model cv_F2 ts_F2 cv_Kappa ts_Kappa cv_AUC ts_AUC cv_AUPRC ts_AUPRC Δ F2 Δ Kappa Δ AUC Δ AUPRC
G_D_SVM-RFE_LR 0.826 0.745 0.555 0.416 0.765 0.772 0.68 0.518 0.081 0.139 −0.007 0.162
G_D_SVM-RFE_RF 0.859 0.618 0.657 0.333 0.857 0.843 0.787 0.734 0.241 0.324 0.014 0.053
G_D_SVM-RFE_XGB 0.868 0.729 0.655 0.354 0.859 0.753 0.792 0.545 0.139 0.301 0.106 0.247
G_S_SVM-RFE_LR 0.831 0.652 0.528 0.32 0.798 0.766 0.742 0.655 0.179 0.208 0.032 0.087
G_S_SVM-RFE_DT 0.868 0.611 0.584 0.301 0.806 0.746 0.545 0.449 0.257 0.283 0.06 0.096
G_S_SVM-RFE_RF 0.862 0.737 0.629 0.385 0.873 0.788 0.841 0.576 0.125 0.244 0.085 0.265
G_S_SVM-RFE_XGB 0.849 0.684 0.551 0.308 0.847 0.728 0.805 0.504 0.165 0.243 0.119 0.301
G_D_mRMR_LR_EN 0.812 0.638 0.557 0.26 0.789 0.755 0.724 0.53 0.174 0.297 0.034 0.194
G_D_mRMR_DT 0.836 0.632 0.556 0.231 0.767 0.634 0.636 0.404 0.204 0.325 0.133 0.232
G_D_mRMR_RF 0.827 0.488 0.636 0.385 0.789 0.757 0.683 0.737 0.339 0.251 0.032 −0.054
G_D_mRMR_XGB 0.84 0.575 0.576 0.314 0.808 0.719 0.718 0.485 0.265 0.262 0.089 0.233
G_S_mRMR_DT 0.884 0.722 0.554 0.325 0.778 0.691 0.405 0.271 0.162 0.229 0.087 0.134
G_S_mRMR_RF 0.853 0.798 0.618 0.494 0.841 0.847 0.8 0.642 0.055 0.124 −0.006 0.158
G_S_mRMR_XGB 0.844 0.729 0.607 0.354 0.814 0.783 0.766 0.576 0.115 0.253 0.031 0.19
G_D_Lasso_DT 0.815 0.568 0.574 0.282 0.808 0.71 0.696 0.346 0.247 0.292 0.098 0.35
G_D_Lasso_RF 0.855 0.722 0.638 0.466 0.826 0.824 0.754 0.659 0.133 0.172 0.002 0.095
G_D_Lasso_XGB 0.84 0.652 0.576 0.32 0.856 0.7 0.798 0.447 0.188 0.256 0.156 0.351
L_S_Lasso_XGB 0.826 0.652 0.56 0.363 0.855 0.755 0.844 0.54 0.174 0.197 0.1 0.304
Lp_D_SVM-RFE_LR_EN 0.806 0.368 0.55 0.001 0.786 0.581 0.706 0.812 0.438 0.549 0.205 −0.106
Lp_S_Boruta_XGB 0.833 0.64 0.591 0.091 0.874 0.646 0.861 0.874 0.193 0.5 0.228 −0.013
Lp_S_mRMR_NB 0.873 0.389 0.554 0.075 0.836 0.55 0.793 0.713 0.484 0.479 0.286 0.08
Lp_S_mRMR_LR 0.872 0.404 0.528 0.006 0.853 0.53 0.804 0.783 0.468 0.522 0.323 0.021
Lp_S_mRMR_LR_EN 0.882 0.49 0.566 0.078 0.849 0.667 0.783 0.862 0.392 0.488 0.182 −0.079
Lp_S_mRMR_RF 0.879 0.44 0.617 0.124 0.881 0.58 0.868 0.805 0.439 0.493 0.301 0.063
Lp_S_mRMR_XGB 0.85 0.427 0.534 0.227 0.864 0.697 0.845 0.871 0.423 0.307 0.167 −0.026
Lp_S_Lasso_XGB 0.852 0.305 0.667 0.073 0.904 0.634 0.907 0.846 0.547 0.594 0.27 0.061