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. 2021 Nov 23;22(23):12620. doi: 10.3390/ijms222312620

Table 1.

Static approach to investigate the role of mitochondrial transport in energy metabolism. Pro vs. Contra.

Biological Sample Approach Pro vs. Contra
Tissue/cell Carrier protein/enzyme purification Pro: can give evidence for the existence and study of metabolite binding to the carrier/enzyme
Contra: NATM
Proteins, lipids Reconstitution study Pro: can show the capability of the isolated protein to work as a carrier when present in proteoliposomes/of the isolated enzyme to catalyze the reaction
Contra: NATM
Proteins Sequencing Pro: can give the possibility to investigate carrier protein/enzyme structure and metabolite binding sites
Contra: NATM
Cell/cell component Cell fractionation Pro: can show both carrier protein/enzyme localization and identification of the organelles involved in transport/catalysis
Contra: NATM
No biological system Bioinformatic analysis Pro: can give a first predictive insight into the localization and the role of a protein and in comparative genetics
Contra: NATM
Cell/cell component Immunological analysis Pro: can give evidence for the existence and the amount of a protein independently on its catalytic properties and localization
Contra: NATM
Cell/cell component Confocal microscopy Pro: can show localization of a protein in vitro
Contra: NATM
Cell/cell component Magnetic resonance spectroscopy Pro: allows to identify the levels of some metabolites in specific anatomical structures,
Contra: NATM
Cell/cell component High-resolution mass spectroscopy Pro: can show that enriched substrate can enter mitochondria by using 13C and 2-2H labels
Contra: NATM
Cell/cell component Transmission electron microscopy Pro: can show the mitochondrial localization
Contra: NATM
Cell/cell component High-performance liquid chromatography (HPLC) Pro: can give qualitative/quantitative analysis in biological sample
Contra: NATM

Abbreviation: NATM, nothing about transport and metabolism both in vitro and in vivo.