TABLE 3.

Summary of reads mapped to the GRCh38/hg38 reference genome.

Item	All	UnMapped	UniqueMapped	UniqueMappedRate (%)	RepeatMapped	Mapped	MappedRate (%)
Patient1-IP	42,055,591	2,367,986	38,154,965	90.73	1,532,640	39,687,605	94.37
Patient2-IP	51,866,184	6,643,849	41,866,190	80.72	3,356,145	45,222,335	87.19
Patient3-IP	45,606,827	3,854,600	39,952,635	87.60	1,799,592	41,752,227	91.55
Control1-IP	43,306,222	3,188,802	38,005,282	87.76	2,112,138	40,117,420	92.64
Control2-IP	44,868,751	2,751,102	40,569,248	90.42	1,548,401	42,117,649	93.87
Control3-IP	44,911,148	4,905,279	36,597,922	81.49	3,407,947	40,005,869	89.08
Patient1-Input	44,180,024	3,943,392	36,724,619	83.12	3,512,013	40,236,632	91.07
Patient2-Input	57,064,051	6,131,507	40,183,337	70.42	10,749,207	50,932,544	89.26
Patient3-Input	39,713,253	5,497,001	31,232,336	78.64	2,983,916	34,216,252	86.16
Control1-Input	43,211,484	4,620,990	34,806,849	80.55	3,783,645	38,590,494	89.31
Control2-Input	43,081,347	4,127,518	35,559,483	82.54	3,394,346	38,953,829	90.42
Control3-Input	40,372,667	4,830,090	31,472,902	77.96	4,069,675	35,542,577	88.04