Table 1.
Cell line | Tissue | Description | # ChIP-seq TFs | # DNase peaks |
---|---|---|---|---|
A549 | Lung | Alveolar carcinoma | 19 | 176,870 |
H1HESC | Stem cell | Male embryo stem cell | 35 | 258,188 |
HELAS3 | Cervix | Cervical adenocarcinoma | 38 | 199,188 |
HEPG2 | Liver | Hepatocellular carcinoma | 45 | 192,959 |
GM12878 | Blood | B-lymphoblastoid cells | 58 | 183,953 |
K562 | Blood | Erythrocytic leukemia | 59 | 202,266 |
For each cell line we show the number of transcription factors (TFs) with ChIP-seq data and the number of DNase-seq peaks (open chromatin regions).