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. 2021 Dec 9;7:46. doi: 10.1038/s41540-021-00203-8

Table 1.

Predicted phenotypes of some gene deletion mutants and comparison with data.

No Genes or
gene family
Proteins or complex Mutant p53-wt Cell phenotypea p53-null Cell
phenotypea
p53-wt Plk1-depleted cell phenotypea p53-null Plk1-depleted cell
phenotypea
Data and source
1

CCNB1

& CCNB2

Cyclin B Cyclin B-null Inviable Inviable Inviable Inviable Inviable65,66
2 CDKN1A p21 p21-null

Viable

Tm/T = 1.0

Viable

Tm/T = 1.0

Viable

Tm/T = 1.3

Viable

Tm/T = 1.9

Viable67
3 CDC25 Cdc25 cdc25-null Inviable Inviable Inviable Inviable Inviable68
4 WEE1 Wee1 wee1-null Inviable Inviable Inviable Inviable Inviable69
5 PLK1 Plk1 plk1-null Inviable Inviable Inviable Inviable Inviable55
6 PP2A PP2A PP2A-null Inviable Inviable Inviable Inviable Inviable70
7 ANAPC1 APC/C APC-null Inviable Inviable Inviable Inviable Inviable71
8 CDC20 Cdc20 cdc20 -null Inviable Inviable Inviable Inviable Inviable72
9 CDH1 Cdh1 cdh1-null

Viable

Tm/T = 0.3

Viable

Tm/T = 0.3

Viable

Tm/T = 0.3

Inviable Suppression by RNAi is viable73
10 PTTG1 Pttg1 pttg1-null

Viable

Tm/T = 1.1

Viable

Tm/T = 1.1

Viable

Tm/T = 1.6

Viable

Tm/T = 2.1

Viable74
11 ATM ATM ATM-null

Viable

Tm/T = 1.0

Viable

Tm/T = 1.0

Viable

Tm/T = 1.4

Viable

Tm/T = 1.4

Viable75
12 TP53 p53 p53-null

Viable

Tm/T = 1.0

Viable

Tm/T = 1.0

Viable

Tm/T = 1.8

Viable

Tm/T = 1.8

Viable55
13 MAD2L1 Mad2 mad2-null

Viable

Tm/T = 1.0

Viable

Tm/T = 1.0

Viable,

Tm/T = 1.4

Viable

Tm/T = 1.8

Viable76
14 CDH1 & CDKN1A Cdh1 & p21 cdh1-null p21-null Inviable Inviable Inviable Inviable Prediction
15 CDKN1A PP2A p21 & PP2A p21-null PP2A-null Inviable Inviable Inviable Inviable Prediction
16 CDKN1A WEE1 p21 & Wee1 p21-null wee1-null Inviable Inviable Inviable Inviable Prediction
17 CDKN1A PTTG1 p21 & Pttg1 p21-null pttg1-null

Viable

Tm/T = 1.1

Viable

Tm/T = 1.1

Viable

Tm/T = 1.6

Viable

Tm/T = 2.2

Prediction
18 CDH1 MAD2 Cdh1 & Mad2 cdh1-null mad2-null Inviable Inviable

Viable

Tm/T = 0.3

Viable

Tm/T = 0.3

Prediction
19 CDC20 PTTG1 Cdc20 & Pttg1 cdc20-null pttg1-null Inviable Inviable Inviable Inviable Prediction
20 CDC20 MAD2 Cdc20 & Mad2 cdc20-null mad2-null Inviable Inviable Inviable Inviable Prediction
21 PP2A MAD2 PP2A & Mad2 PP2A-null mad2-null Inviable Inviable Inviable Inviable Prediction
22 PP2A PTTG1 PP2A & Pttg1 PP2A-null pttg1-null Inviable Inviable Inviable Inviable Prediction
23 CDC25 WEE1 Cdc25 & Wee1 cdc25-null wee1-null Inviable Inviable Inviable Inviable Prediction

aTm/T is the ratio of cell cycle periods observed in the mutants Tm and in wild-type cancer cells T.