Table 2.
The genes found in 50 kbp distances from the detected significant SNPs in GWAS, based on BioMart tool of Ensembl database (www.ensembl.org).
| SNP | Chr | Location (bp) | Gene | Strand | Gene start (bp) | Gene end (bp) | Distance |
|---|---|---|---|---|---|---|---|
| rs411530530 | 3 | 181680527 | PKP2 | F | 181710282 | 181800739 | − 29755 |
| rs401001039 | 4 | 107694115 | – | F | – | – | – |
| rs429230884 | 7 | 86283700 | ENSOARG00000017510 | F | 86330934 | 86331638 | − 47234 |
| rs427910139 | 8 | 82987574 | IGF2R | F | 82874886 | 82959397 | 28177 |
| SLC22A1 | F | 82967383 | 83002611 | Within | |||
| SLC22A2 | R | 83028720 | 83060568 | − 41146 |
PKP2: Plakophilin 2; IGF2R: Insulin like growth factor 2 receptor; SLC22A1: Solute carrier family 22 member 1; SLC22A2: Solute carrier family 22 member 2; F and R: forward and reverse strands, respectively; Negative and positive distances indicate the SNPs before and after the genes, respectively.