Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2021 Sep 4;38(12):5423–5436. doi: 10.1093/molbev/msab252

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2021. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

PMC Copyright notice

Fig. 3. — Recombination among CrERVs. Shown is a maximum likelihood phylogeny based on a region spanning a portion of pol to 5′env (JN592050: 4,422–7,076). Taxa used are a subset of full-length nonrecombinant CrERVs representing the four lineages shown in figure 2 and CrERVs with a recombinant signature containing a Lineage B env. Supported nodes (aLRT≥0.85) are represented by black dots on the backbone of the tree. Lineage designation is assigned to supported branches based on the nonrecombinant CrERV. Over this interval, Lineage B CrERVs are found as a sister group to Lineage A CrERV but some CrERV containing a prototypical Lineage B env are dispersed among Lineage A CrERV. Note that in this interval Lineage C CrERVs cluster with Lineage A CrERVs.