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. 2021 Nov 24;143(48):20109–20121. doi: 10.1021/jacs.1c06264

Figure 1.

Figure 1

Influence of step size on conformational ensembles. (A) Examples of conformations of a model protein with accessible volumes (AVs) of Alexa488 (green) and Alexa594 (red), calculated using 100, 500, 1000, or 10 000 iterations (steps) for position determination. (B) Distance histogram over accessible volumes calculated over a 100 conformer ensemble using 100 (light gray), 500 (blue), 1000 (dark gray), and 10 000 (black) dye positions sampled iteratively.