Table 2.
Summary characteristics of transcriptome sequence assembly of all three samples data.
| D. raddei nairensis | D. valentini | D. unisexualis | |
|---|---|---|---|
| # contigs (>= 0 bp) | 122746 | 126141 | 228862 |
| # contigs (>= 1000 bp) | 39398 | 39145 | 57984 |
| # contigs (>= 5000 bp) | 3517 | 3533 | 2447 |
| # contigs (>= 10000 bp) | 134 | 118 | 8 |
| # contigs (>= 25000 bp) | 0 | 0 | 0 |
| # contigs (>= 50000 bp) | 0 | 0 | 0 |
| Total length (>= 0 bp) | 139903614 | 140424203 | 204321108 |
| Total length (>= 1000 bp) | 105256962 | 104453618 | 138481341 |
| Total length (>= 5000 bp) | 22937215 | 22851989 | 14738047 |
| Total length (>= 10000 bp) | 1524044 | 1315073 | 90998 |
| Total length (>= 25000 bp) | 0 | 0 | 0 |
| Total length (>= 50000 bp) | 0 | 0 | 0 |
| # contigs | 61836 | 62123 | 95141 |
| Largest contig | 16187 | 14170 | 12181 |
| Total length | 121008445 | 120525010 | 164367910 |
| GC (%) | 46,23 | 46,19 | 46,06 |
| N50 | 2827 | 2801 | 2409 |
| N75 | 1567 | 1558 | 1378 |
| L50 | 13677 | 13716 | 22778 |
| L75 | 27887 | 27951 | 45070 |
| # N's per 100 kbp | 0.0 | 0.0 | 0.0 |