TABLE 4.
GO clusters of genes located on TAD boundaries of AA and LS chicken breast muscles.
| Breed | Category | GO_ID | GO_Terms | p-value |
|---|---|---|---|---|
| LS | BP | GO:0050829 | defense response to Gram-negative bacterium | 1.2575E-05 |
| BP | GO:0050830 | defense response to Gram-positive bacterium | 1.41986E-05 | |
| BP | GO:0045087 | innate immune response | 0.00086 | |
| BP | GO:0051673 | membrane disruption in other organism | 0.00378 | |
| BP | GO:0010629 | negative regulation of gene expression | 0.00672 | |
| CC | GO:0005739 | mitochondrion | 0.00891 | |
| BP | GO:0019835 | cytolysis | 0.02061 | |
| BP | GO:0010628 | positive regulation of gene expression | 0.02377 | |
| MF | GO:0001530 | lipopolysaccharide binding | 0.02779 | |
| BP | GO:0048589 | developmental growth | 0.03351 | |
| BP | GO:0008219 | cell death | 0.03717 | |
| AA | BP | GO:0042742 | defense response to bacterium | 0.00402 |
| CC | GO:0005576 | extracellular region | 0.00509 |
Note: BP, represents biological process; CC, represents cellular component; MF, represents molecular function.