Table 2.
The top 10 genes noncoding RNA differentially expressed between liver and muscle from control female sheep
| Highly expressed in liver | Highly expressed in muscle | ||||
|---|---|---|---|---|---|
| Gene | log2FC | Padj | Gene | log2FC | Padj |
| Long ncRNA | |||||
| LOC114110111 | –6.23 | .000 | LOC105603743 | 11.09 | .000 |
| LOC105603426 | –5.5 | .000 | LOC105604459 | 7.92 | .000 |
| LOC114110424 | –4.61 | .004 | LOC114113790 | 6.18 | .000 |
| LOC114110280 | –4.15 | .02 | LOC114112617 | 5.25 | .01 |
| LOC105616344 | –3.79 | .000 | LOC105604726 | 5 | .006 |
| LOC105608433 | –3.72 | .05 | LOC114109081 | 4.97 | .001 |
| LOC114116879 | –3.7 | .05 | LOC105616014 | 4.85 | .001 |
| LOC114114068 | –3.59 | .000 | LOC114114816 | 4.83 | .003 |
| LOC114116820 | –3.56 | .06 | LOC105613565 | 4.53 | .02 |
| LOC101116687 | –3.42 | .000 | LOC114116861 | 4.48 | .05 |
| MicroRNA | |||||
| MIR200B | –7.77 | .000 | MIR133 | 5.3 | .001 |
| MIR200A | –6.57 | .000 | MIR10B | 5.3 | .000 |
| MIR194 | –4.95 | .000 | MIR181A-2 | 3.26 | .000 |
| MIR369 | –4.4 | .000 | MIR362 | 3.08 | .000 |
| MIR148A | –3.5 | .000 | MIR150 | 2.91 | .000 |
| MIR200C | –3.28 | .000 | MIR3955 | 1.98 | .09 |
| MIR152 | –2.57 | .000 | MIRLET7B | 1.78 | .000 |
| MIR411A | –2.5 | .000 | MIR30D | 1.68 | .000 |
| MIR655 | –2.44 | .003 | MIR30C | 1.65 | .000 |
| MIR410 | –2.28 | .10 | MIR30B | 1.58 | .000 |
| snoRNA | |||||
| LOC114116284 | –4.92 | .000 | LOC114111821 | 4.87 | .000 |
| LOC114117649 | –4.62 | .02 | LOC114115466 | 4.59 | .05 |
| LOC114116761 | –4.2 | .002 | LOC114114231 | 4.31 | .09 |
| LOC114110519 | –4.17 | .000 | LOC114111320 | 3.98 | .000 |
| LOC114110194 | –4.08 | .000 | LOC114116763 | 3.95 | .08 |
| LOC114117064 | –4.03 | .000 | LOC114115071 | 3.34 | .000 |
| LOC114115928 | –3.68 | .000 | LOC114114261 | 3.31 | .000 |
| LOC114111381 | –3.48 | .000 | LOC114114654 | 3.09 | .000 |
| LOC114113382 | –3.48 | .000 | LOC114111371 | 2.77 | .08 |
| LOC114117378 | –3.38 | .06 | LOC114110700 | 2.41 | .07 |
| snRNA | |||||
| LOC114110196 | 2.55 | 0.09 | |||
ncRNA genes with adjusted P value (Padj) less than .1 comparing muscle vs liver gene expression in control tissues of the prenatal testosterone cohort. Positive values in fold change (FC) denote enriched in muscle and negative values represent ncRNA that enriched in liver.
Abbreviations: snoRNA, small nucleolar RNA; snRNA, small nuclear RNA.