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. 2021 Dec 2;10:e71656. doi: 10.7554/eLife.71656

Table 2. Metal coordination geometries found in RtcB structures.

Species PDB ID Chain Metal Ligand Metal coordination geometry
Position A Position B
Homo sapiens 7P3B A, B Co2+ GMP Tetrahedral Octahedral
Pyrococcus horikoshii 4DWQ A, B Mn2+ GMP* Trigonal bipyramidal
4IT0 A Mn2+ GMP* Tetrahedral Trigonal pyramidal
B Mn2+ Tetrahedral Tetrahedral
4ISZ A Mn2+ GTPαS Tetrahedral Tetrahedral
B Mn2+ GTPαS Trigonal bipyramidal Tetrahedral
4DWR A, B, C Mn2+ SO42- Octahedral Tetrahedral
4ISJ A, B Mn2+ Tetrahedral
*

Denotes a GMP ligand covalently bound to the His404 of PhRtcB.