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. 2021 Nov 30;12:772007. doi: 10.3389/fmicb.2021.772007

TABLE 2.

Summary of chemical characteristics of shale rock (SR), bacteria-inhabited shale rock (BISR), bacterial culture (SR-BC), and sterile control (SR-SC).

Analysis Field samples
Laboratory studies
SR BISR SR-BC SR-SC
Sedimentary porphyrins – monitoring of specific ion
SIM VO(MTPP), VO(OEP), Ni(OEP) VO(MTPP), VO(OEP), Ni(OEP), VO(DPP), Ni(TEP), VO(TEP), NiP, VOP - VO(MTPP), VO(OEP), Ni(OEP)
Organic compounds containing porphyrin ring – detection of specific absorption maxima UV-VIS
Soret band 380, 401 420 - 380, 401
Q band 516/549, 529/571 538/576 - 516/549, 529/571
Organic compounds containing pyrrole ring – detection of specific ion
3 pyrrole rings (m/z: 201) - 3-[2-[[3-(2-Carboxyethyl)-5-[(3.4-dimethyl-5-oxopyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl]methylidene]-4-methyl-5-oxopyrrol-3-yl]propanoic acid 3-[(5Z)-5-[[4-Ethenyl-5-[(Z)-(4-ethenyl-3-methyl-5-oxopyrrol-2-ylidene)methyl]-3-methyl-1H-pyrrol-2-yl]methylidene]-4-methyl-2-oxopyrrol-3-yl]propanoate 3-[(5Z)-5-[[4-Ethenyl-5-[(Z)-(4-ethenyl-3-methyl-5-oxopyrrol-2-ylidene)methyl]-3-methyl-1H-pyrrol-2-yl]methylidene]-4-methyl-2-oxopyrrol-3-yl]propanoate -
2 pyrrole rings (m/z: 134) - 3,3′-Bipyrrole, 2,2′-Bipyrrole, 1,1′-Bipyrrole-2,2′,5,5′-tetraone 3,3′-Bipyrrole, 2,2′-Bipyrrole, 3,3′,4,4′-Tetramethyl-1H,1′H-2,2′-bipyrrole-5,5′-dicarboxylic acid -
1 pyrrole ring (m/z: 67) - 1H-Pyrrole, Indole acetic acid, Indole carbaldehyde 1H-Pyrrole-2-carboxylic acid Indole acetic acid 1H-Indole-2-carboxylic acid Indole carbaldehyde 2H-Pyrrol-2-one, 5-[[2-[(4-aminophenyl)methylene]-3,4-dimethyll]methylene]-3-ethyl-1,5-dihydro- 4-methyl -
Organic compound containing nickel, vanadium and/or nitrogen
Nickel C31HxN4Ni C4HxNNi, C14HxN2Ni C8HxN2Ni, C10HxNi, C12HxN2Ni, C14HxNNi, C16HxNNi, C18HxNNi C31HxN4Ni
Vanadium C44HxN4V C4HxV, C6HxN2V, C8HxN2V, C24HxN4V, C44HxN4V C4HxV, C4HxNV, C5HxNV, C8HxN2V, C12HxN2V, C18HxN2V C44HxN4V