| Antibodies |
|
| Rat anti-CD31 (use at 1:200) |
BD Pharmingen |
Cat#553370 |
| Rabbit anti-VE-Cadherin (use at 1:500) |
Abcam |
Cat#ab33168 |
| Goat anti-Iba1 (use at 1:1000) |
Abcam |
Cat#ab107159 |
| Goat anti-PDGRβ (use at 1:200) |
R&D systems |
Cat#AF1042 |
| Guinea pig anti-NeuN (use at 1:1500) |
Millipore Sigma |
Cat#ABN90 |
| Guinea pig anti-GFAP (use at 1:1000) |
Synaptic Systems |
Cat#173004 |
| Mouse anti-αSMA (use at 1:200) |
Sigma-Aldrich |
Cat#A2547 |
| Donkey anti-Rat IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 488 (use at 1:300) |
Invitrogen |
Cat#A-21208 |
| Donkey anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 568 (use at 1:300) |
Invitrogen |
Cat#A-10042 |
| Donkey anti-Rabbit IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor 647 (use at 1:300) |
Invitrogen |
Cat#A-31573 |
| Donkey anti-goat IgG (H+L) cross-absorbed secondary antibody, Alexa Fluor 568 (use at 1:300) |
Invitrogen |
Cat#A-11057 |
| Goat anti-guinea pig IgG (H+L) Highly cross-absorbed secondary antibody, Alexa Fluor 488 (use at 1:300) |
Invitrogen |
Cat#A-11073 |
| Goat anti-guinea pig IgG (H+L) Highly cross-absorbed secondary antibody, Alexa Fluor 647 (use at 1:300) |
Invitrogen |
Cat#A-21450 |
| Donkey anti-mouse IgG (H+L) cross-absorbed secondary antibody, Alexa Fluor 568 (use at 1:300) |
Invitrogen |
Cat#A10037 |
| Alexa Fluor™ 488 Phalloidin (use at 1:40) |
Invitrogen |
Cat#A12379 |
|
| Chemicals, peptides, and recombinant proteins |
|
| EGMTM-2 MV Microvascular Endothelial Cell Growth Medium-2 BulletKitTM
|
Lonza |
Cat#CC-3202 |
| Penicillin-Streptomycin (10,000 U/mL) |
Thermo Fisher Scientific |
Cat#15140122 |
| HBSS without calcium/magnesium |
Gibco |
Cat#14170-120 |
| HBSS with calcium/magnesium |
Gibco |
Cat#14025-092 |
| Attachment factor 1× |
Gibco |
Cat#S-006-100 |
| Albumin, Bovine (BSA) |
VWR |
Cat#0332-100G |
| CD31 MicroBeads, Mouse |
Miltenyi Biotec |
Cat#130-097-418 |
| Myelin Removal Beads II, human, mouse, rat |
Miltenyi Biotec |
Cat#130-096-733 |
| CD45 MicroBeads, Mouse |
Miltenyi Biotec |
Cat#130-052-301 |
| Sterile 1× PBS |
Wisent BioProducts |
Cat#311-011-CL |
| TrypLE™ Express Enzyme (1×), no phenol red |
Thermo Fisher Scientific |
Cat#12604013 |
| Alconox detergent |
VWR |
Cat#21835-032 |
| Virkon® S Disinfectant and Virucide |
Fisher Scientific |
Cat#NC9549979 |
| CellEvent™ Caspase-3/7 Green Detection |
Thermo Fisher Scientific |
Cat#C10423
|
| Staurosporine |
Thermo Fisher Scientific |
Cat# BP2541100 |
| Hoechst 33342, Trihydrochloride, Trihydrate-10 mg/mL Solution in Water |
Invitrogen |
Cat#H3570 |
| Paraformaldehyde 20% Solution, EM grade |
Electron Microscopy Sciences |
Cat#15713-S |
| Fluoromount-G™ |
Electron Microscopy Sciences |
Cat#17984-25 |
| Triton-X-100 |
VWR |
Cat#0694-1L |
| Fish gelatin blocking buffer, 10% |
VWR |
Cat#M319-500mL |
| Donkey serum, sterile filtered |
Wisent Bioproducts |
Cat#035-150 |
| Dimethyl sulfoxide,DMSO |
sigma-Aldrich |
Cat#D8418-100mL |
| DAPI |
Invitrogen |
Cat#D1306 |
| Matrigel® Matrix Basement Membrane, Growth Factor Reduced |
Fisher Scientific |
Cat#354230 |
| Sodium chloride (NaCl) |
VWR |
Cat#0241-5KG |
| Sodium phosphate dibasic anhydrous (Na2HPO4) |
VWR |
Cat#0404-1KG |
| Sodium phosphate monobasic (NaH2PO4H2O) |
VWR |
Cat#BDH9298.2.5 |
| β-mercaptoethanol, Molecular biology grade |
Merck Millipore |
Cat#444203 |
|
| Critical commercial assays |
|
| Neural Tissue Dissociation Kit (P) |
Miltenyi Biotec |
Cat#130-092-628 |
| Click-iT™EdU Alexa Fluor™ 594 Imaging Kit |
Invitrogen |
Cat#C10339
|
| E.Z.N.A.® HP Total RNA Kit |
OMEGA bio-tek |
Cat#R6812-01 |
| RNase-free DNase I Set |
OMEGA bio-tek |
Cat#E1091 |
|
| Experimental models: Organisms/strains |
|
| Mouse: B6129SF1/J (14 days old, male or female) |
The Jackson Laboratory |
Cat#101043 |
|
| Software and algorithms |
|
| IncuCyte® ZOOM Software |
Essen Bioscience |
N/A |
| Fiji Image J |
Schindelin et al., 2012 |
https://imagej.net/software/fiji/ |
| Angiogenesis Analyzer for Image J |
Carpentier, 2012 |
https://imagej.nih.gov/ij/macros/toolsets/Angiogenesis%20Analyzer.txt |
|
| Other |
|
| 70 μM pore size strainer |
VWR |
Cat#76327-100 |
| LS columns |
Miltenyi Biotec |
Cat#130-042-401 |
| LD columns |
Miltenyi Biotec |
Cat#130-042-901 |
| MACS® MultiStand |
Miltenyi Biotec |
Cat#130-042-303 |
| QuadroMACS™ separator |
Miltenyi Biotec |
Cat#130-090-976 |
| IncuCyte® ImageLock Plates |
Essen Bioscience |
Cat#4379 |
| IncuCyte® 96-well WoundMaker Tool |
Essen Bioscience |
Cat#4563 |
| German glass coverslips, 12 mm round, #1 thickness |
Mandel |
Cat#NEU-GG-12-1.5-OZ |
| Corning® cryogenic vials, internal thread |
Millipore sigma |
Cat#CLS431386 |
| Mr. Frosty™ Freezing Container |
Thermo Fisher Scientific |
Cat#5100-0001 |
| Superfrost Plus Microscope Slides |
Fisher Scientific |
Cat#12-550-15 |
| 96-Well Tissue Culture Plate, Non-treated, Sterilized, Non-Pyrogenic |
VWR |
Cat#10861-562 |
| IncuCyte™ Zoom® Apparatus |
Essen Bioscience |
N/A |
| Nikon Eclipse TE2000-E inverted microscope |
Nikon |
N/A |
| Zeiss Axio Imager M2 microscope |
Zeiss |
N/A |
| Axiocam 506 mono |
Zeiss |
N/A |
| ApoTome.2 module |
Zeiss |
N/A |