TABLE 1.
SNPs reported in seed sequence of miRNA in various cancers.
| S. No | miRNA | Gene | SNP reported | Tumor type | Reference |
|---|---|---|---|---|---|
| 1 | miR-379 | SEMA3F | rs61991156 | Gastric cancer | Cao et al. (2016) |
| A>G | |||||
| 2 | miR-627 | SEMA3F | rs2620381 | ESCC- esophageal squamous cell carcinoma | Cao et al. (2016) |
| A>C | |||||
| 3 | miR-499-3p | PBX1, FOXO1A | rs3746444 | BC, ALL, colorectal, liver, SCC of head and neck, gallbladder cancer | Xiang et al. (2012); Cao et al. (2016); Ahmad et al. (2019) |
| A>G | |||||
| 4 | miR-124 | VAMP3, CD164, PTPN12, ITGB1 | rs34059726 | Lung cancer | Yang et al. (2016); Fawzy et al. (2017) |
| G>T | |||||
| 5 | miR-642a | ATP6VOE1 | rs78902025 | Leiomyoma | Pelletier et al. (2011); Cao et al. (2016) |
| T>G | |||||
| 6 | miR-4293 | SLC43A2 | rs12220909 | NSCLC | Malhotra et al. (2019b) |
| A>C | |||||
| 7 | miR-146a-3p | BRCA1, TRAF6, IRAK1, NUMB | rs2910164 | BC, HCC, PTC, ESCC, colorectal and primary liver cancer | Yekta et al. (2004); Vitale et al. (2011); Xiang et al. (2012); Zhou et al. (2012); Iguchi et al. (2016) |
| C>G | |||||
| 8 | MiR-4707 | CARD10 | rs2273626 | Rectal cancer | Shvarts et al. (1996); Erturk et al. (2014) |
| C>A | |||||
| 9 | miR-4707 | HAUS4 | Rs2273626 | Rectal cancer | Marine et al. (2006); Erturk et al. (2014) |
| C>A | |||||
| 10 | miR-125a | Lin-28, lin-41, ERBB2, ERBB3 | rs12975333 | Breast cancer | Jin et al. (2008); Tian et al. (2009); Ristori et al. (2017) |
| G>A | |||||
| 11 | miR-662 | ATPVOE1 | rs9745376 | Ovarian cancer | Jin et al. (2008) |
| G>A/C/T | |||||
| 12 | miR-196-a2 | HOX, ANXA1 | rs11614913 | HCC, BC, NSCLC, bladder, renal, gastric, lung, glioma, head and neck, squamous cancer | Solito et al. (2001); Dou et al. (2010); Nicoloso et al. (2010); Ferracin et al. (2011); Peng and Croce (2016); Malhotra et al. (2019a); Zhao, (2020) |
| C>T | |||||
| 13 | miR-585 | SLIT3 | rs62376935 | Pharynx squamous cell carcinoma | Pelletier et al. (2011); Fawzy et al. (2017) |
| C>T | |||||
| 14 | miR-605 | PRKGI | rs113212828 | Ovarian cancer | Pelletier et al. (2011) |
| A>G | |||||
| 15 | miR-367-5p | LARP7 | rs150161032A > G | Testicular germ cell tumor, leukemia | Strachan et al. (2003); Matijasevic et al. (2008) |
| 16 | miR-627 | ATP6VOE1 | rs2620381 | Ovarian cancer, osteoblastoma | Jin et al. (2008); Cao et al. (2016) |
| A>C | |||||
| 17 | miR-3161 | PTPRJ | rs11382316 | Colorectal cancer | Fawzy et al. (2017) |
| -/A |