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. 2021 Dec 15;11:24042. doi: 10.1038/s41598-021-03245-4

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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The genus-level taxonomic profile of bacteria in COVID-19 (C1–C8), Recovered (R1–R7) and Healthy (H1–H7) nasopharyngeal samples. The relative abundance of 30 most abundant bacterial genera are sorted from bottom to top by their deceasing proportion, with the remaining genera keeping as ‘Other genera’. Each stacked bar plot represents the abundance of bacterial genera in each sample of the corresponding category. Notable differences in bacterial populations are those where the taxon is abundant in COVID-19 and Recovered samples, and effectively undetected in the Healthy controls. The distribution and relative abundance of the bacterial genera in the study metagenomes are also available in Data S1. The bar plot is generated using Microsoft Excel program.