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. 2021 Dec 15;11:24042. doi: 10.1038/s41598-021-03245-4

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© The Author(s) 2021

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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The species-level taxonomic representation of microbiome in COVID-19, Recovered and Healthy metagenomes. Taxonomic dendrogram in the midpoint rooted phylogenetic tree was generated with top abundant 200 species of bacteria found in three metagenomes. The tree was built based on the maximum likelihood method in Clustal W (https://www.ebi.ac.uk/Tools/msa/clustalo/) and displayed with iTOL (interactive Tree Of Life; https://itol.embl.de/). Color ranges identify different species within the tree. Species are color-coded by different phyla of bacteria present in > 90% of samples. The species-level information of the phylogenetic tree is also available in Data S1.