Table 3.
Numbers of bacterial species altered in the CMG-treated groups compared with the Control group.
| Samples | Feces | Ileal contents | Ileal mucosa | |||
|---|---|---|---|---|---|---|
| ↑ | ↓ | ↑ | ↓ | ↑ | ↓ | |
| Induction | 5 a | 7 b | Barnesiella sp., Parasutterella excrementihominis | 6 c | Bifidobacterium choerinum | 3 d |
| Latent | Enterorhabdus mucosicola, Pseudobutyrivibrio spp. | 5 e | Senegalimassilia anaerobia |
Parabacteroides distasonis, Alistipes putredinis |
Blautia sp. | 0 |
| Whole | 4 f | 16 g | 6 h | 8 i | Parasutterella excrementihominis | 8 j |
↑, increased bacterial species; ↓, decreased bacterial species.
A. Feces
Induction↑: Pseudobutyrivibrio spp., Enterorhabdus mucosicola, Parasutterella excrementihominis, Barnesiella sp., Bacteroides acidifaciens.
Induction↓: Pseudoflavonifractor bacteroides capillosus, Butyricicoccus pullicaecorum, Lachnoclostridium clostridium hathewayi, Lachnoclostridium clostridium aldenense, Marvinbryantia bryantella formatexigens, Blautia (Ruminococcus) gnavus, Syntrophococcus sp.
Latent↓: Alloprevotella rava, Gloeobacter spp., Blautia (Ruminococcus) gnavus, Ruminiclostridium eubacterium siraeum, Roseburia faecis.
Whole↑: Olsenella spp., Parasutterella excrementihominis, Kopriimonas spp., Bacteroides acidifaciens.
Whole↓: Alloprevotella rava, Dehalobacterium spp., Pseudoflavonifractor bacteroides capillosus, Butyricicoccus pullicaecorum, Anaerosporobacter mobilis, Clostridium spp., Roseburia faecis, Lachnoclostridium clostridium hathewayi, Ruminococcus sp., Eubacterium plexicaudatum, Marvinbryantia bryantella formatexigens, Fastidiosipila sanguinis, Ruminococcus bromii, Blautia (Ruminococcus) gnavus, Syntrophococcus sp., Erysipelatoclostridium clostridium innocuum.
Induction↑ and Latent↑: Enterohabdus mucosicola, Pseudobutyrivibrio spp. (Increases in Enterorhabdus mucosicola and Pseudobutyrivibrio spp. in the Induction and Latent groups, but not in the Whole group).
Induction↓ and Whole↓: Marvinbryantia bryantella formatexigens, Syntrophococcus sp. (Marvinbryantia bryantella formatexigens and Syntrophococcus sp. decreased in the Induction and Whole groups).
Latent↓ and Whole↓: Roseburia faecis (The Latent and Whole groups had a decrease in Roseburia faecis).
Induction↓, Latent↓, and Whole↓: Blautia (Ruminococcus) gnavus [All CMG-treated groups had a decrease in Blautia (Ruminococcus) gnavus].
B. Ileal contents
Induction↓: Clostridium spp., Ruminiclostridium eubacterium siraeum, Blautia (Ruminococcus) gnavus, Blautia sp., Subdoligranulum spp., Coprococcus catus.
Whole↑: Azoarcus spp., Pandoraea sp., Olsenella spp., Eubacterium xylanophilum, Parasutterella excrementihominis, Bacteroides acidifaciens.
Whole↓: Turicibacter sp., Parabacteroides distasonis, Alistipes finegoldii, Alistipes putredinis, Odoribacter splanchnicus, Lachnoclostridium clostridium polysaccharolyticum, Clostridium fusiformis, Syntrophococcus sp.
Induction↑ and Whole↑: Parasutterella excrementihominis.
Latent↓ and Whole↓: Paracteroides distansonis, Alistipes putredinis.
C. Ileal mucosa
Induction↓: Lachnoclostridium clostridium saccharolyticum, Lachnoclostridium clostridium hathewayi, Clostridium perfringens.
Whole↓: Clostridium disporicum, Alistipes massiliensis, Azoarcus spp., Lachnoclostridium clostridium saccharolyticum, Enterorhabdus mucosicola, Burkholderia spp., Clostridium fusiformis, Clostridium perfringens.
Induction↓ and Whole↓: Lachnoclostridium clostridium saccharolyticum, Clostridium perfringes.