Table 2. Haploid admixture vector clusters for 1000 Genomes individuals.
Superpopulation name | Cluster | NorthEastAsian | Mediterranean | SouthAfrican | SouthWestAsian | NativeAmerican | Oceanian | SouthEastAsian | Northern European | SubsaharanAfrican | #parents |
---|---|---|---|---|---|---|---|---|---|---|---|
African | African Ancestry SW_1 | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 2% | 98% | 71 |
African Ancestry SW_2 | 0% | 4% | 0% | 1% | 1% | 0% | 0% | 15% | 78% | 45 | |
African Ancestry SW_3 | 0% | 9% | 0% | 2% | 54% | 0% | 0% | 8% | 27% | 6 | |
African Caribbean_1 | 0% | 14% | 0% | 10% | 0% | 0% | 5% | 10% | 62% | 6 | |
African Caribbean_2 | 0% | 1% | 0% | 0% | 0% | 0% | 0% | 8% | 90% | 26 | |
African Caribbean_3 | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 100% | 160 | |
Esan_0 | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 100% | 198 | |
Gambian Mandinka_0 | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 100% | 226 | |
Luhya_0 | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 100% | 198 | |
Mende_0 | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 100% | 170 | |
Yoruba_0 | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 100% | 216 | |
American | Colombian_1 | 0% | 43% | 0% | 6% | 38% | 0% | 0% | 2% | 11% | 86 |
Colombian_2 | 0% | 60% | 0% | 12% | 22% | 0% | 0% | 4% | 1% | 94 | |
Mexican Ancestry_1 | 0% | 35% | 0% | 3% | 59% | 0% | 0% | 1% | 2% | 60 | |
Mexican Ancestry_2 | 0% | 53% | 0% | 10% | 33% | 0% | 0% | 4% | 1% | 46 | |
Mexican Ancestry_3 | 0% | 9% | 0% | 0% | 91% | 0% | 0% | 0% | 0% | 22 | |
Peruvian_1 | 1% | 27% | 0% | 1% | 64% | 0% | 1% | 1% | 6% | 48 | |
Peruvian_2 | 0% | 14% | 0% | 0% | 84% | 0% | 0% | 0% | 1% | 50 | |
Peruvian_3 | 0% | 0% | 0% | 0% | 100% | 0% | 0% | 0% | 0% | 72 | |
Puerto Rican_1 | 0% | 59% | 0% | 12% | 16% | 0% | 0% | 3% | 10% | 180 | |
Puerto Rican_2 | 0% | 16% | 0% | 1% | 6% | 0% | 0% | 9% | 67% | 6 | |
East Asian | Dai Chinese_0 | 66% | 0% | 0% | 0% | 0% | 0% | 34% | 0% | 0% | 184 |
Han Chinese_0 | 77% | 0% | 0% | 0% | 0% | 0% | 23% | 0% | 0% | 394 | |
Japanese_0 | 82% | 0% | 0% | 0% | 0% | 0% | 18% | 0% | 0% | 208 | |
Vietnamese_0 | 65% | 0% | 0% | 0% | 0% | 0% | 35% | 0% | 0% | 198 | |
European | British_0 | 0% | 46% | 0% | 21% | 0% | 0% | 0% | 34% | 0% | 182 |
CEPH_0 | 0% | 47% | 0% | 20% | 0% | 0% | 0% | 33% | 0% | 198 | |
Finnish_0 | 7% | 17% | 0% | 22% | 0% | 0% | 1% | 53% | 0% | 186 | |
Iberian_0 | 0% | 72% | 0% | 16% | 0% | 0% | 0% | 12% | 0% | 214 | |
Toscani_0 | 0% | 82% | 0% | 18% | 0% | 0% | 0% | 0% | 0% | 214 | |
South Asian | Bengali_0 | 0% | 0% | 0% | 64% | 0% | 0% | 36% | 0% | 0% | 172 |
Gujarati_1 | 0% | 0% | 0% | 74% | 0% | 0% | 26% | 0% | 0% | 180 | |
Gujarati_2 | 0% | 12% | 0% | 70% | 0% | 0% | 18% | 0% | 0% | 26 | |
Punjabi_1 | 0% | 16% | 0% | 67% | 0% | 0% | 17% | 0% | 0% | 89 | |
Punjabi_2 | 0% | 1% | 0% | 70% | 0% | 0% | 29% | 0% | 0% | 103 | |
Tamil_0 | 0% | 0% | 0% | 69% | 0% | 0% | 31% | 0% | 0% | 204 | |
Telugu_0 | 0% | 0% | 0% | 70% | 0% | 0% | 30% | 0% | 0% | 204 |
Note:
Supervised admixture using phased haploid data.