Table 3. GPS and reAdmix.
| Super-population | Population | Number of individuals | GPS, fraction of populations self-hits | GPS, fraction of super-population hits | reAdmix, fraction of populations self-hits | reAdmix, fraction of super-population hits |
|---|---|---|---|---|---|---|
| African | African Ancestry SW | 61 | 0.34 | 0.85 | 0.58 | 0.98 |
| African Caribbean | 96 | 0.56 | 0.97 | 0.47 | 0.99 | |
| Esan | 99 | 0.07 | 1.00 | 0.96 | 1.00 | |
| Gambian Mandinka | 113 | 0.01 | 1.00 | 0.01 | 1.00 | |
| Luhya | 99 | 0.07 | 1.00 | 0.00 | 1.00 | |
| Mende | 85 | 0.92 | 1.00 | 0.01 | 1.00 | |
| Yoruba | 108 | 0.19 | 1.00 | 0.10 | 1.00 | |
| American | Colombian | 94 | 0.65 | 0.96 | 0.46 | 0.70 |
| Mexican Ancestry | 64 | 0.5 | 0.97 | 0.17 | 0.89 | |
| Peruvian | 85 | 0.8 | 0.98 | 0.86 | 0.96 | |
| Puerto Rican | 104 | 0.85 | 0.93 | 0.63 | 0.78 | |
| East Asian | Dai Chinese | 93 | 0.62 | 1.00 | 0.62 | 1.00 |
| Han Chinese | 208 | 0.71 | 1.00 | 0.25 | 1.00 | |
| Japanese | 104 | 0.96 | 1.00 | 0.89 | 1.00 | |
| Vietnamese | 99 | 0.41 | 1.00 | 0.37 | 1.00 | |
| European | British | 91 | 0.58 | 1.00 | 0.89 | 0.99 |
| CEPH | 99 | 0.57 | 1.00 | 0.13 | 0.99 | |
| Finnish | 99 | 0.97 | 1.00 | 0.90 | 0.99 | |
| Iberian | 107 | 0.94 | 1.00 | 0.84 | 0.98 | |
| Toscani | 107 | 1 | 1.00 | 0.99 | 0.99 | |
| Southeast Asian | Bengali | 86 | 0.9 | 1.00 | 0.72 | 1.00 |
| Gujarati | 103 | 0.69 | 1.00 | 0.52 | 0.99 | |
| Punjabi | 96 | 0.59 | 1.00 | 0.46 | 0.98 | |
| Tamil | 102 | 0.59 | 1.00 | 0.73 | 1.00 | |
| Telugu | 102 | 0.34 | 1.00 | 0.34 | 1.00 |
Note:
Results of GPS and reAdmix analyses. For each population, we report factions of self-hits (when the tool correctly identifies the population label) and superpopulation hits (when a superpopulation is correctlyidentified).