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. 2021 Dec 6;49(22):13045–13061. doi: 10.1093/nar/gkab1148

Figure 1.

Figure 1.

HDNMT2 catalyzes m5C38 modification on tRNAGly(GCC) in vitro. (A) SDS-PAGE analysis of the purified recombinant hDNMT2. Standard molecular weights are shown on the left. (B) The purified hDNMT2 was analyzed by gel filtration chromatography on a Superdex™ 200 column. HDNMT2 was eluted at 15.5 ml. The evolution volume of the standard proteins was marked above the graph. (C) The secondary structures of tRNAGly(GCC), tRNAAsp(GUC), and tRNAVal(.AC). (D) The capacity of tRNAGly(GCC) and the three mutants which were generated by in vitro transcription: -C38A, -C38G, -C38U to be methylated by hDNMT2. (E) tRNAGly(GCC) and the -C38G, and -C38A mutants incubated with hDNMT2 analyzed by UPLC-MS/MS analysis after digestion. Chromatogram of m5C (Q1/Q3 = 258.1/126.1) and A (Q1/Q3 = 268.1/136.2) are described, respectively. Error bars represent the standard errors of three independent experiments in Figures 18.