Table 4.
Twelve BSLMs based on TF-IDF
Category | Model | Description |
---|---|---|
DNA | Kmer-TF-IDF | Kmer-based TF-IDF (30,33) |
RevKmer-TF-IDF | Reverse-complementary-Kmer- based TF-IDF (30,33–35) |
|
Mismatch-TF-IDF | Mismatch-based TF-IDF (30,36–38) | |
Subsequence-TF-IDF | Subsequence-based TF-IDF (30,36,38,39) | |
RNA | Kmer- TF-IDF | Kmer-based TF-IDF (30,40) |
Mismatch-TF-IDF | Mismatch-based TF-IDF (30,36–38) | |
Subsequence-TF-IDF | Subsequence-based TF-IDF (30,36,38,39) | |
Protein | Kmer-TF-IDF | Kmer-based TF-IDF (30,41) |
Mismatch-TF-IDF | Mismatch-based TF-IDF (30,37) | |
DR-TF-IDF | Distance-Residue-based TF-IDF (30,43) | |
Top-n-gram-TF-IDF | Top-n-gram-based TF-IDF(30,42) | |
DT-TF-IDF | Distance-Top-n-gram-based TF-IDF (30,43) |