Table 1.
Pre | Post | p | Effect Size (95% CI) | |
---|---|---|---|---|
Actinobacteria | ||||
g_Bifidobacterium | 0.37 (0.16 - 1.27) | 2.33 (1.41 - 4.91) | 0.004 | 0.71 (0.37 - 0.88) |
Bacteroidetes | ||||
g_Bacteroides | 32.3 (20.1 - 38.4) | 21.1 (8.5 - 34.2) | 0.163 | 0.34 (0.03 - 0.71) |
g_Parabacteroides | 2.43 (1.04 - 4.01) | 1.39 (0.55 - 2.39) | 0.019 | 0.57 (0.15 - 0.83) |
g_Prevotella | 0.42 (0.01 - 4.77) | 0.03 (0.01 - 2.45) | 0.041 | 0.48 (0.15 - 0.82) |
f_Rikenellaceae; g_ | 2.86 (0.82 - 4.19) | 3.18 (1.27 - 4.17) | 0.523 | 0.15 (0.02 - 0.54) |
Firmicutes | ||||
g_Lactobacillus | 0.00 (0.00 - 0.01) | 0.00 (0.00 - 0.01) | 0.866 | 0.05 (0.01 - 0.55) |
g_Streptococcus | 0.14 (0.07 - 0.48) | 0.23 (0.14 - 1.01) | 0.435 | 0.19 (0.01 - 0.67) |
g_Turicibacter | 0.18 (0.05 - 0.51) | 0.19 (0.04 - 0.62) | 0.586 | 0.13 (0.01 - 0.59) |
f_Clostridiaceae; g_ | 0.38 (0.07 - 1.25) | 0.27 (0.07 - 0.81) | 0.723 | 0.09 (0.01 - 0.55) |
f_Lachnospiraceae; g_[Ruminococcus] | 0.88 (0.75 - 2.02) | 1.07 (0.85 - 1.84) | 0.381 | 0.21 (0.01 - 0.61) |
g_Blautia | 2.54 (1.78 - 3.14) | 3.88 (1.83 - 9.50) | 0.062 | 0.45 (0.07 - 0.77) |
g_Coprococcus | 2.15 (1.29 - 3.16) | 2.73 (1.65 - 3.52) | 0.113 | 0.38 (0.02 - 0.75) |
g_Dorea | 0.38 (0.16 - 0.62) | 0.67 (0.37 - 1.82) | 0.019 | 0.57 (0.06 - 0.88) |
g_Lachnospira | 0.84 (0.15 - 2.36) | 0.41 (0.03 - 0.50) | 0.007 | 0.65 (0.31 - 0.87) |
g_Roseburia | 2.70 (1.39 - 6.02) | 1.81 (1.12 - 4.21) | 0.227 | 0.29 (0.02 - 0.64) |
f_Lachnospiraceae; g_ | 3.25 (1.09 - 4.17) | 2.79 (2.28 - 4.64) | 0.831 | 0.05 (0.00 - 0.51) |
f_Peptostreptococcaceae; g_ | 0.97 (0.38 - 1.55) | 1.08 (0.46 - 1.86) | 0.593 | 0.17 (0.02 - 0.72) |
g_Faecalibacterium | 3.25 (2.54 - 4.21) | 3.76 (2.99 - 6.41) | 0.266 | 0.27 (0.02 - 0.65) |
g_Oscillospira | 1.73 (0.91 - 2.43) | 2.08 (0.45 - 4.49) | 0.246 | 0.28 (0.04 - 0.76) |
g_Ruminococcus | 0.91 (0.26 - 2.59) | 1.73 (0.68 - 4.32) | 0.055 | 0.46 (0.08 - 0.86) |
f_Ruminococcaceae; g_ | 3.27 (1.98 - 6.06) | 7.48 (4.73 - 8.36) | 0.003 | 0.72 (0.36 - 0.88) |
o_Clostridiales; f_; g_ | 0.83 (0.40 - 2.88) | 0.60 (0.34 - 2.29) | 0.493 | 0.17 (0.01 - 0.62) |
g_Dialister | 0.17 (0.01 - 3.17) | 2.77 (0.00 - 3.46) | 0.972 | 0.03 (0.00 - 0.51) |
g_Phascolarctobacterium | 0.37 (0.00 - 2.21) | 0.03 (0.00 - 0.58) | 0.039 | 0.55 (0.13 - 0.85) |
g_Veillonella | 0.03 (0.01 - 0.16) | 0.00 (0.00 - 0.03) | 0.084 | 0.39 (0.04 - 0.83) |
f_Erysipelotrichaceae; g_ | 0.29 (0.12 - 0.77) | 0.60 (0.23 - 1.15) | 0.068 | 0.44 (0.05 - 0.78) |
Proteobacteria | ||||
g_Escherichia | 0.46 (0.15 - 3.68) | 0.13 (0.02 - 0.66) | 0.062 | 0.45 (0.03 - 0.77) |
g_Sutterella | 0.71 (0.22 - 1.45) | 0.15 (0.12 - 0.38) | 0.039 | 0.50 (0.12 - 0.87) |
Verrucomicrobia | ||||
g_Akkermansia | 0.00 (0.00 - 0.42) | 0.07 (0.00 - 1.77) | 0.767 | 0.08 (0.01 - 0.58) |