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. 2021 Dec 18;22:905. doi: 10.1186/s12864-021-08237-2

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© The Author(s) 2021

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

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Fig. 2 — Distribution of the physical distances between adjacent variants tiled on the DSN200k SNP chip per chromosome. Boxplots are shown for all variants on the DSN200k SNP chip (light green) and successfully called variants in all 300 genotyped DSN animals (green). The red line indicates the maximum distance of 250 kb aimed for during chip design. Two gaps longer than 250 kb exist on chromosomes 10 and 12, and ten gaps on the Y chromosome that could not be filled with variants. New gaps longer than 250 kb but shorter than 500 kb appeared due to failing variants after genotyping