TABLE 3.
Frequency of gene mutation for 1st-and 2nd-line anti-TB drugs.
Drug | Target gene | Mutation | N (%) ≥ 1 DR | N (%) MDR-TB | Pre-XDR | Total (N) |
RIF (25) | rpoB | S450L | − | 16 (64) | 2 (8) | 18 (72) |
H445N | − | 2 (8) | − | 2 (8) | ||
H445Y | − | 1 (4) | − | 1 (4) | ||
H445D | − | 1 (4) | − | 1 (4) | ||
D435Y | − | 1 (4) | − | 1 (4) | ||
D435V | − | 1 (4) | − | 1 (4) | ||
L430P | 1 (4) | − | − | 1 (4) | ||
INH (26) | katG | S315T | 2 (7.7) | 21 (80.8) | 2 (7.7) | 25 (96.2) |
fabG1 | C-15T | − | 1 (3.8) | − | 1 (3.8) | |
EMB (18) | embB | M306I | 1 (5.6) | 3 (16.7) | − | 4 (22.1) |
D328G/Y | 4 (16.7) | − | 4 (22.2) | |||
G406A | − | 3 (16.7) | 3 (16.7) | |||
M306V | − | 2 (11.1) | − | 2 (11) | ||
Q497K | − | 1 (5.6) | − | 1 (5.6) | ||
D354A | − | − | 1 (5.6) | 1 (5.6) | ||
M306I; G406A | − | − | 1 (5.6) | 1 (5.6) | ||
G406A; D1024N | − | 1 (5.6) | − | 1 (5.6) | ||
M306I; G406S | − | 1 (5.6) | − | 1 (5.6) | ||
SM (24) | gid | 115del | 1 (4.2) | − | − | 1 (4.2) |
351del | − | 1 (4.2) | − | 1 (4.2) | ||
102del | − | 1 (4.2) | − | 1 (4.2) | ||
G69D | − | 1 (4.2) | − | 1 (4.2) | ||
rpsL, gid | K88T; G69D | − | 3 (12.5) | − | 3 (12.5) | |
rpsL | K88T | − | 1 (4.2) | − | 1 (4.2) | |
K43R | 1 (4.2) | 12 (50) | 1 (4.2) | 14 (58) | ||
rrs | A514C | − | 1 (4.2) | − | 1 (4.2) | |
C517T | − | − | 1 (4.2) | 1 (4.2) | ||
PZA (10) | pncA | V139A | − | 2 (20) | − | 2 (20) |
F58L | − | 1 (10) | − | 1 (10) | ||
F13L | − | 1 (10) | − | 1 (10) | ||
P69L | − | 1 (10) | − | 1 (10) | ||
G46G | − | 1 (10) | − | 1 (10) | ||
T76P | − | 1 (10) | − | 1 (10) | ||
V180F | − | 1 (10) | − | 1 (10) | ||
Q141P | − | 1 (10) | − | 1 (10) | ||
D49A | − | 1 (10) | − | 1 (10) | ||
ETH (11) | ethA | M1R | − | 5 (45.5) | − | 5 (45.5) |
other | − | 4 (36.4) | 1 (9) | 5 (45.5) | ||
fabG1 | C-15T | − | 1 (9) | − | 1 (9) | |
FLQs (1) | gyrA | D94G | − | − | 1 (100) | 1 (100) |
AMK (1) | rrs | A1401G | − | − | 1 (100) | 1 (100) |
KAM (1) | rrs | A1401G | − | − | 1 (100) | 1 (100) |
CAP (2) | rrs | A1401G | − | − | 1 (50) | 1 (50) |
tlyA | N236K | 1 (50) | − | − | 1 (50) |
N, number; DR, drug resistance; MDR, multi drug resistant; Pre-XDR, Pre-extensively drug resistant.