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. Author manuscript; available in PMC: 2021 Dec 20.
Published in final edited form as: Cell Rep. 2021 Aug 24;36(8):109578. doi: 10.1016/j.celrep.2021.109578

KEY RESOURCES TABLE

REAGENT or RESOURCE Antibodies SOURCE IDENTIFIER
APC/Cy7 anti-mouse CD3 (17A2) BioLegend Cat# 100221; RRID:AB_2057374
BV-421 CD45 (30-F11) BioLegend Cat# 103133; RRID:AB_10899570
PE anti-mouse F4/80 (BM8) BioLegend Cat# 123109; RRID:AB_893498
PE anti-mouse Foxp3 (FJK-16 s) Invitrogen Cat# 12-5773-80; RRID:AB_465935
APC/Cy7 anti-mouse CD11b (M1/70) BioLegend Cat# 101225; RRID:AB_830641
PE anti-mouse CD80 (16-10A1) BioLegend Cat# 104733; RRID:AB_2563112
PerCP/Cy5.5 anti-mouse CTLA4 (UC10-4B9) BioLegend Cat# 106315; RRID:AB_2564473
APC/Cy7 anti-mouse MHCII I-A/I-E (M5/114.15.2) BioLegend Cat# 107627; RRID:AB_1659252
PE anti-mouse Gr1 (RB6-8C5) BioLegend Cat# 108407; RRID:AB_313372
APC anti-mouse Ly6G (1A8) BioLegend Cat# 127613; RRID:AB_1877163
APC anti-mouse CD206 (C068C2) BioLegend Cat# 141707; RRID:AB_10896057
Mouse BD Fc Block (2.4G2) BD pharmingen Cat# 553142; RRID:AB_394657
PE mouse anti-mouse T-Bet (4B10) BD pharmingen Cat# 561265; RRID:AB_10565980
APC anti-mouse CD4 (GK1.5) BioLegend Cat# 100411; RRID:AB_312696
PE/Cy7 CD8 (53-6.7) BioLegend Cat# 100721; RRID:AB_312760
PerCP/Cy5.5 anti-mouse CD8 (53-6.7) BioLegend Cat# 100733; RRID:AB_2075239
PerCP/Cy5.5 anti-mouse CD86 (GL-1) BioLegend Cat# 105027; RRID:AB_893420
PerCP/Cy5.5 Ep-CAM (G8.8) BioLegend Cat# 107627; RRID:AB_1659252
PerCP/Cy5.5 anti-mouse PD1 (29F.1A12) BioLegend Cat# 135207; RRID:AB_10550092
Pe/Cy7 anti-mouse IFN-g (XMG1.2) BioLegend Cat# 505825; RRID:AB_1595591
PE anti-mouse CD31 (390) BioLegend Cat# 102407; RRID:AB_312902
Pe/Cy7 anti-mouse PDGFRa (APA5) BioLegend Cat# 135911; RRID:AB_2715973
PE anti-mouse CD11c (N418) BioLegend Cat# 117307; RRID:AB_313776
PE IgG1k isotype control Invitrogen Cat# 12-4301-81; RRID:AB_470046
Pe/Cy7 Rat IgG1 isotype control BioLegend Cat# 400415; RRID:AB_326521
InVivo rat IgG2a mAb (2A3) isotype control BioXCell Cat# BE0089; RRID:AB_1107769
InVivoMAb monoclonal anti-mouse Ly6G (1A8) BioXCell Cat# BE0075-1; RRID:AB_1107721
InVivoMAb CD40 rat anti-mouse IgG2a mAb (FGK45) BioXCell Cat# BE0016-2; RRID:AB_1107647
InVivoMAb anti-rat Kappa Immunoglobulin Light Chain BioXCell Cat# BE0122; RRID:AB_10951292
APC anti-mouse CD34 (HM34) BioLegend Cat #128611; RRID:AB_10553895
MPO antibody Santa Cruz Cat# sc-390109; RRID:AB_2892996
Neutrophil Marker (NIMP-R14) antibody Santa Cruz Cat# sc-59338; RRID:AB_2167795
P53 (1C12) Mouse antibody Cell Signaling Cat# 2524S; RRID:AB_331743
Anti-Vinculin mouse antibody SigmaAldrich Cat# V9264; RRID:AB_10603627

Bacterial and virus strains

STBL3 ThermoFisher Cat# C737303

Chemicals, Peptides, and Recombinant Proteins

Nab-paclitaxel Celgene Cat# 68817-134-50
Gemcitabine Hospira Cat# 0409-0181-01
Albumin Sigma Aldrich Cat# A5843
Xtremegene 9 Roche Cat# 06 365 779 001
Polybrene Sigma Aldrich Cat# TR-1003-G
Hygromycin Sigma Aldrich Cat# 400053
G418 Sigma Aldrich Cat# 345812
PfIFI New England Biolabs Cat# R0595S
BsmBI New England Biolabs Cat#R0739S
Shield-1 Cheminpharma Cat# S1-001
Lipofectamine 3000 Life Technologies Cat# L3000008

Critical commercial assays

Surveyor DNA mutation Kit IDT Cat# 706020
TOPO TA Cloning Kit Thermo-Fisher Cat# K4575J10
SYBR Green PCR Master Mix Thermo-Fisher Cat# 4309155
Quantitect Reverse Transcription Kit QIAGEN Cat# 205311
Zombie Green Fixable Viability Kit Biolegend Cat# 423111
RNeasy Mini Kit QIAGEN Cat# 157029548
Milliplex Mouse Cytokine Magnetic Bead Panel Millipore Sigma Cat# MCYTOMAG-70K-03
KAPA Mouse Genotyping Kit Roche Cat# 07961804001
Foxp3/Transcription Factor Staining Buffer Set Invitrogen Cat# 00-5523-00

Experimental models: Cell lines

HEK293T ATCC Cat# ATCC® CRL-3216
KrasG12D/+;Trp53+/+PDEC Pylayeva-Gupta et al., 2012 N/A
KrasG12D/+;Trp53−/− PDEC This manuscript N/A
KrasG12D/+;Trp53R172H/+PDEC This manuscript N/A

Experimental models: Organisms/strains

C57Bl6/J mice females (6-10weeks) Charles River Laboratories CR: 632

Oligonucleotides
p53 sgRNA, CGG AGC AGC GCT CAT GGT GG This manuscript N/A

p53 HDR template, CAC CTC CAG CTG GGA GCC GTG TCC GCG CCA TGG CCA TCT ACA AGA AGT CAC AGC ACA TGA CGG AAG TCG TGA GAC ACT GTC CCC ACC ATG AGC GCT GCT CCG ATG GTG ATG GTA AGC CCT CAA CAC CGC CTG TGG GGT TAG GAC TGG CAG This manuscript N/A
p53 Forward PCR primer, TGGGA CAGCCAAGTCTGTTA This manuscript N/A
p53 Reverse PCR primer CCTGCT GTCTCCAGACTCCT This manuscript N/A
shScramble CCGGTCCTAAGGTTA AGTCGCCCTCGCTCGAGCGAGGG CGACTTAACCTTAGGTTTT Sarbassov et al., 2005 Addgene Cat # 1864
CXCL2 forward PCR primer ATGC CTGAAGACCCTGCCAAG Roy et al., 2012 N/A
CXCL2 reverse PCR primer GGTC AGTTAGCCTTGCCTTTG Roy et al., 2012 N/A
CXCL5 forward PCR primer ACAGT GCCCTACGGTGGAAGT Roy et al., 2012 N/A
CXCL5 reverse PCR primer CGAGT GCATTCCGCTTAGCTT Roy et al., 2012 N/A

Recombinant DNA

pLKO.1 neo Gift from Sheila Stewart Addgene Cat# 13425
psPAX2 Gift from Didier Trono Addgene Cat# 12260
pMD2G Gift from Didier Trono Addgene Cat# 12259
pLKO.1 hygro Gift from Bob Weinberg Addgene Cat# 24150
LentiCRISPRv2 hygro Stringer et al., 2019 Addgene Cat# 98291
conditional EDCPV Gift from R. Sordella, Cold Spring Harbor Laboratory N/A

Software and algorithms

ImageJ Schneider et al., 2012 https://imagej.nih.gov/ij/; RRID:SCR_001935
FlowJo version 10.2 FlowJo https://www.flowjo.com/solutions/flowjo/downloads; RRID:SCR_008520
R version 3.4.3 RStudio http://www.R-project.org; RRID:SCR_000432
Prism Version 7 GraphPad https://www.graphpad.com/scientific-software/prism/; RRID:SCR_002798
Vevo Lab FUJIFILM-VisualSonics https://www.visualsonics.com/product/software/vevo-lab

Other

Whole-Tissue Gene Expression Data of Pancreatic Ductal Adenocarcinoma Badea et al., 2008 GSE15471
Expression data from Mayo Clinic Pancreatic Tumor and Normal samples Pei et al., 2009 GSE16515