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. Author manuscript; available in PMC: 2022 Dec 16.
Published in final edited form as: Mol Cell. 2021 Nov 18;81(24):4979–4993.e7. doi: 10.1016/j.molcel.2021.10.026

KEY RESOURCES TABLE

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Rabbit anti-γH2AX GeneTex GTX127342; RRID:AB_2833105
Rabbit anti Phospho-p44/42 MAPK (Erk1/2)(Thr202/Tyr204) Cell Signaling Technology CST-4370S; RRID:AB_2895021
Goat anti-rabbit IgG H&L (Alexa FluorTM 594) Invitrogen A11012; RRID:AB_141359
Goat anti-rabbit IgG H&L (Alexa FluorTM 488) Invitrogen A11008; RRID:AB_143165
DAPI/Antifade (250 ng/ml) counterstain Santa Cruz Biotechnology sc-3598
Parp1 Antibody Abcam ab194586; RRID:AB_2895023
Anti-GAPDH Antibody (0411) Santa Cruz Biotechnology sc-47724; RRID:AB_627678
Chemicals, Peptides, and Recombinant Proteins
Etoposide (ETO) SIGMA-ALDRICH E1383
NU1025 SIGMA-ALDRICH N7287
Pentylenetetrazole (PTZ) SIGMA-ALDRICH P6500
Dimethyl Sulfoxide (DMSO) SIGMA-ALDRICH D8418
Paraformaldehyde (PFA), prills, 95% SIGMA-ALDRICH 441244
Polyethylene glycol 200 (PEG-200) SIGMA-ALDRICH 8.07483
Dulbecco’s Phosphate Buffered Saline (PBS), 10X Conc., without Calcium and Magnesium Biological Industries 02-023-5A
Fetal Bovine Serum (FBS) Biological Industries 041271A
Alt-R® S.p. Cas9 Nuclease V3, 100 μg IDT 1081058
Experimental Models: Organisms/Strains
Zebrafish: tg(HuC:Gal4) (Plucińska et al., 2012) N/A
Zebrafish: tg(dbh:Gal4) Current work N/A
Zebrafish: tg(fli1:EGFP) (Lawson and Weinstein, 2002) N/A
Zebrafish: tg(sox10:EGFP) ZFIN ZDB-TGCONSTRCT-150414-3
Zebrafish: tg(uas:DsRed-Rad52) Current work N/A
Zebrafish: tg(uas:DsRed-TRF1) Current work N/A
Zebrafish: tg(HuC:GCaMP5) (Romano et al., 2017) N/A
Zebrafish: tg(ChR2-mCherry) (Helmbrecht et al., 2018) N/A
Zebrafish: tg(uas:Lap2β-EGFP) Current work N/A
Mice: C57BL/6j Envigo/ in house breeding N/A
Oligonucleotides
Primers for cloning and RT-PCR (Methods details) Current work N/A
sgRNA list (Method details) Current work N/A
Recombinant DNA
Plasmid: pT2-uas:DsRed-Rad52 Current work N/A
Plasmid: pT2-uas:dsRed-Rad52R49A Current work N/A
Plasmid: pT2-uas:Ku80-EGFP Current work N/A
Plasmid: pT2-uas:ku80D721A/D722A-EGFP Current work N/A
Plasmid: pT2-uas:Lap2β-EGFP (Zada et al., 2019) N/A
Plasmid: pT2-uas:Lap2βLEMdel-EGFP Current work N/A
Plasmid: pT2-hsp70:Parp1 Current work N/A
Software and Algorithms
EthoVision XT 12 software Noldus Information Technology N/A
MATLAB Mathworks https://www.mathworks.com/products/matlab.html
Imaris Oxford Instruments N/A
ImageJ NIH imageJ https://imagej.nih.gov/ij/
Excel Microsoft https://office.microsoft.com/excel/
Other
Noldus DanioVision tracking system Noldus Information Technology N/A
CFX96 Real-Time PCR BIO RAD N/A
Direct-zol RNA MiniPrep kit Zymo Research Corporation ZR-R2051
qScript cDNA SuperMix Quanta BioSciences 95047
PerfeCTa SYBR Green FastMix Quanta BioSciences 95073
Comet assay kit Abcam ab238544