TABLE 1.
Comparison of capsular genotype with proportional estimates by Campylobacter jejuni isolates source and collection year.
| Capsular genotype | Source of Campylobacter jejuni isolate |
Collection year |
Total (n = 1609) | ||||||
| Poultry (n = 1084) | Enteritis patient (n = 233) | Cattle (n = 181) | Pet (n = 55) | Monkey (n = 52) | 2005–2008 (n = 576) | 2014–2016 (n = 138) | 2017–2019 (n = 895) | ||
| HS2 | 10.42% (113/1084) | 13.08% (31/237) | 25.97% (47/181) | 12.73% (7/55) | 13.46% (7/52) | 10.07% (58/576) | 16.67% (23/138) | 13.85% (124/895) | 12.74% (205/1609) |
| HS4A ca | 13.10% (142/1084) | 11.81% (28/237) | 11.05% (20/181) | 5.45% (3/55) | 5.77% (3/52) | 15.45% (89/576) | 0.00% (0/138) | 11.96% (107/895) | 12.18% (196/1609) |
| HS1 | 7.84% (85/1084) | 12.66% (30/237) | 3.31% (6/181) | 12.73% (7/55) | 1.92% (1/52) | 10.76% (62/576) | 16.67% (23/138) | 4.92% (44/895) | 8.02% (129/1609) |
| HS8/17 | 6.64% (72/1084) | 7.17% (17/237) | 8.29% (15/181) | 0.00% (0/55) | 7.69% (4/52) | 6.60% (38/576) | 18.84% (26/138) | 4.92% (44/895) | 6.71% (108/1609) |
| HS6 | 4.43% (48/1084) | 2.53% (6/237) | 1.10% (2/181) | 0.00% (0/55) | 5.77% (3/52) | 1.39% (8/576) | 5.80% (8/138) | 4.80% (43/895) | 3.67% (59/1609) |
| HS53 | 3.87% (42/1084) | 2.11% (5/237) | 3.87% (7/181) | 1.82% (1/55) | 0.00% (0/52) | 5.73% (33/576) | 2.17% (3/138) | 2.12% (19/895) | 3.42% (55/1609) |
| HS37 | 3.32% (36/1084) | 4.64% (11/237) | 3.31% (6/181) | 0.00% (0/55) | 1.92% (1/52) | 3.82% (22/576) | 2.17% (3/138) | 3.24% (29/895) | 3.36% (54/1609) |
| HS4B cb | 1.66% (18/1084) | 2.53% (6/237) | 9.94% (18/181) | 0.00% (0/55) | 5.77% (3/52) | 3.30% (19/576) | 0.00% (0/138) | 2.91% (26/895) | 2.80% (45/1609) |
| HS23/36 | 1.38% (15/1084) | 6.33% (15/237) | 1.66% (3/181) | 5.45% (3/55) | 3.85% (2/52) | 3.65% (21/576) | 2.90% (4/138) | 1.45% (13/895) | 2.36% (38/1609) |
| HS3 | 1.57% (17/1084) | 7.17% (17/237) | 1.10% (2/181) | 7.27% (4/55) | 1.92% (1/52) | 4.34% (25/576) | 2.90% (4/138) | 1.34% (12/895) | 2.55% (41/1609) |
| HS10 | 2.12% (23/1084) | 2.11% (5/237) | 2.21% (4/181) | 0.00% (0/55) | 0.00% (0/52) | 2.43% (14/576) | 2.90% (4/138) | 1.56% (14/895) | 1.99% (32/1609) |
| HS19 | 0.46% (5/1084) | 2.95% (7/237) | 9.94% (18/181) | 3.64% (2/55) | 0.00% (0/52) | 2.78% (16/576) | 2.17% (3/138) | 1.45% (13/895) | 1.99% (32/1609) |
| HS9 | 1.85% (20/1084) | 1.69% (4/237) | 0.55% (1/181) | 7.27% (4/55) | 0.00% (0/52) | 2.95% (17/576) | 2.17% (3/138) | 1.01% (9/895) | 1.80% (29/1609) |
| HS21 | 1.94% (21/1084) | 3.80% (9/237) | 0.00% (0/181) | 1.82% (1/55) | 1.92% (1/52) | 1.74% (10/576) | 10.14 (14/138) | 0.89% (8/895) | 1.99% (32/1609) |
| HS5/31 | 1.29% (14/1084) | 3.38% (8/237) | 1.66% (3/181) | 1.82% (1/55) | 5.77% (3/52) | 1.39% (8/576) | 2.90% (4/138) | 2.01% (18/895) | 1.80% (29/1609) |
| HS44 | 0.92% (10/1084) | 0.42% (1/237) | 0.55% (1/181) | 3.64% (2/55) | 1.92% (1/52) | 0.69% (4/576) | 1.45% (2/138) | 1.01% (9/895) | 0.93% (15/1609) |
| HS42 | 0.37% (4/1084) | 2.95% (7/237) | 0.00% (0/181) | 0.00% (0/55) | 0.00% (0/52) | 1.56% (9/576) | 0.00% (0/138) | 0.22% (2/895) | 0.68% (11/1609) |
| HS12 | 0.00% (0/1084) | 1.69% (4/237) | 0.55% (1/181) | 0.00% (0/55) | 0.00% (0/52) | 0.69% (4/576) | 0.00% (0/138) | 0.11% (1/895) | 0.31% (5/1609) |
| HS41 | 0.00% (0/1084) | 0.00% (0/237) | 0.00% (0/181) | 0.00% (0/55) | 5.77% (3/52) | 0.00% (0/576) | 0.00% (0/138) | 0.34% (3/895) | 0.19% (3/1609) |
| HS15/31 | 0.00% (0/1084) | 0.42% (1/237) | 0.55% (1/181) | 0.00% (0/55) | 0.00% (0/52) | 0.17% (1/576) | 0.00% (0/138) | 0.11% (1/895) | 0.12% (2/1609) |
aHS4A complex, including HS4, HS13, and HS6.
bHS4B complex, including CG8486, HS16, and HS64.